Cyclopterus lumpus (lumpfish): 117741616
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Entry
117741616 CDS
T09199
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04010
MAPK signaling pathway
clum04020
Calcium signaling pathway
clum04510
Focal adhesion
clum04540
Gap junction
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117741616 (pdgfd)
04020 Calcium signaling pathway
117741616 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117741616 (pdgfd)
04540 Gap junction
117741616 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117741616 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117741616 (pdgfd)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Growth factors (RTK binding)
117741616 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
117741616
NCBI-ProteinID:
XP_034404646
Ensembl:
ENSCLMG00005006691
LinkDB
All DBs
Position
13:complement(1459990..1505530)
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AA seq
367 aa
AA seq
DB search
MSSTVVFHMWTMFLLWTLSTAEVSTAKVLRGNIRRDDFYRKEENVTVTSVGGAIHSPRFP
NAYPRNLLLSWKLLSPPGSRIHLEFDGHFGLEEAENGLCRYDFVEVEDQSETSTIIWGRW
CGQKAPPSLNSKSNKLRVTFKSDDYFVAKPGFKVCYSLMYDSPLPASNTNWEAVTMPMSD
RAGGRMPAAVTEVPFSLEDLDRTIAAFDTVEQLFRSLSPDTWKQDLDSIYTQTHIHYRSR
AYHLASRHNKVDLNRLYDDVKRYSCTPRNYSVNLREELKATNAVFFPRCLLVKKCGGNCG
CGTENWNNGCTCEASKKTLKLHEVLKYTPDVSLYQRHQRPRVRWVIDEIFLTHHEKCECV
CPSQPPR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaccgtggttttccacatgtggacgatgttcttgttgtggactttatcgacg
gctgaggtctccaccgccaaagtgctgaggggcaacatcaggagagacgacttttaccgc
aaagaggaaaacgtcacagtaacgtcagtgggcggagccatccacagcccacgcttcccc
aacgcttacccccgcaatctgctgttgtcatggaaactgctgtcgccaccagggagccgc
attcacttggagtttgacggacactttggcctggaggaggccgagaatggactgtgcagg
tatgactttgttgaagtggaggaccaatcagagaccagcactataatttggggtcgctgg
tgtgggcagaaggcaccgcctagtctcaactccaaaagcaacaagctcagagtcaccttc
aagtctgacgattactttgttgcaaagccaggattcaaagtctgctactcactgatgtat
gactctcctctgcctgcatccaacaccaactgggaggctgtcactatgcccatgtcggac
agggcaggagggcggatgccagcggcagtcacagaggttcctttctcattggaggatttg
gaccggaccatagctgcctttgacactgtagaacagcttttcagatccctgagcccagac
acctggaaacaggacctggacagtatctatactcaaacacacatacattatagatccagg
gcctatcatctggcaagcagacataataaagttgatctgaaccgtctctatgacgacgtc
aagcggtacagctgtacgcctcgcaactactctgtgaacctgcgtgaggagctgaaggcc
accaacgccgtcttcttccctcgatgtctgctagttaaaaaatgtggaggcaactgtggc
tgcggaaccgagaactggaacaacggctgcacctgtgaggcctccaagaagacactcaaa
ctacacgaggtgctgaagtacaccccagatgtcagcctgtatcagcgccatcagaggccg
cgggtgcgctgggtcatagatgagatcttcctcacgcaccatgaaaagtgcgagtgtgtg
tgtccctcccagcccccccgttga
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