Cyclopterus lumpus (lumpfish): 117741678
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Entry
117741678 CDS
T09199
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59 isoform X1
KO
K12028
tripartite motif-containing protein 59
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117741678 (trim59)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117741678 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
MgrB
Motif
Other DBs
NCBI-GeneID:
117741678
NCBI-ProteinID:
XP_034404760
Ensembl:
ENSCLMG00005016462
UniProt:
A0A8C3A0U5
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All DBs
Position
13:5711946..5716922
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AA seq
430 aa
AA seq
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MDNLEEDLTCSVCYSLFADPRVLPCSHTFCKTCLDNLLQVSTNYSIWRPLRLPLKCPQCR
SVVELPPMGVDSLPTNISLRAIIEKYQSDSAPRHPSCQEHHRQPLNMYCIQDRQLICGLC
LTVGQHQDHPIDDLQAAFDREKQTPSLLLASLSEQRWGQVCELGEQLEQEKVRCEGLVRQ
DRQEVHQFFQSLEVVLARKRHAYLEALDKAGAEVSQVYDPLIHRVKALQEEQMDLVSLGS
SVEEEDSPLIFLEQVHLFRERVEEFIKTPLPSVINLSVTPRAAEHLQRHWPAVTIGSLED
APVPTVCCCARCGGVEAGVETEAGRRDQSDSRGPRLWWELQPTLPVMLLGLLLLTLLLWV
NPVGGASLGFSLLAQFSQLVHGLSSELITSVWDTAGSACTVLEAAVERWSSRLSSVGEKT
SQQLAAFLKN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctagaggaggacttgacgtgctctgtgtgctactctctgttcgctgaccca
cgtgtcctgccgtgctcgcacaccttctgtaagacctgcctggacaacctgctccaggtg
tctaccaactattccatctggcgtccactccgcctgccgctaaaatgcccccaatgccgc
agcgtggtagagctgcccccgatgggcgtagactctctgcccaccaacatatctctgcga
gccatcatcgagaaataccagagtgacagtgcaccgcgacacccttcctgtcaggagcac
cacaggcagcctctgaacatgtactgcatccaggatcggcagctgatctgtgggctgtgt
ctgactgtcgggcagcaccaggaccatcccatagatgaccttcaggcagcattcgacaga
gaaaaacagactccatcgctactgctggccagcctctcagagcagagatggggacaggtg
tgtgagctgggggagcagctggagcaggagaaggtccgctgtgagggtctagtgaggcag
gaccgacaggaggttcatcagttttttcagtcgctggaggtggtgctggccaggaagaga
cacgcctacctggaggcactggataaagcgggtgcagaggtgtcccaggtttacgaccct
ctcattcacagagtaaaggcactccaggaagaacagatggacctggtgtccttgggttca
tccgtagaggaggaggactcgccgttgatcttcctggagcaggtccatttgttccgagag
agggttgaagagtttattaaaacccctctgccctcggtgataaacctctccgtcactccg
cgggcagcagagcacctgcagcggcactggcctgctgtgactatcgggagcctggaggac
gcacctgtccctacggtgtgctgctgcgccagatgtggcggtgtggaggctggtgtggaa
acggaagccggacgaagggatcagtccgacagccgggggccgaggttgtggtgggaactg
cagcccactctccctgtgatgctgctggggctgctgctgctaacgctgctgctctgggtc
aacccggtcgggggggcgtcactcggtttctctctgctcgctcagtttagtcagttagtc
cacggcctgagcagtgaactgatcacatctgtctgggacacagcagggtcagcttgcact
gtgttggaggccgctgtagaaagatggagctctcgcctctcctcagtgggggaaaagaca
tcccagcagcttgctgcctttttaaaaaactga
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