Cyclopterus lumpus (lumpfish): 117741696
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Entry
117741696 CDS
T09199
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
clum03110
]
117741696 (clpb)
Chaperones and folding catalysts [BR:
clum03110
]
Heat shock proteins
HSP100
117741696 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
ClpB_D2-small
AAA
AAA_5
Ank_5
Ank_4
Zeta_toxin
Sigma54_activat
AAA_22
Torsin
AAA_16
AAA_24
AAA_3
nSTAND3
NACHT
YchF-GTPase_C
RuvB_N
ABC_tran
ATPase_2
KAP_NTPase
SRP54
Motif
Other DBs
NCBI-GeneID:
117741696
NCBI-ProteinID:
XP_034404791
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All DBs
Position
13:994834..1023862
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AA seq
686 aa
AA seq
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MLSSVPTRLIARRSRSLSPCSRVLKTSAGGAACQAVRQTPVEINRNPIVSTSRVSRRGIL
AEETTATSVTPSVQYHHIAPRWLSNLENRRGSWAALASRGRNNNQFWEESGQSGGGGGGG
GGGGGSQGTGGGASRAGATSIGLLSAAAVAFCLKKDSDNKGDALLEAARSNNSQDVARLV
EEGVDPNHRHRLGWTALMVAAMNRQHSVIKVLLEAGADPNTGDHFNNVYDTSREKGIHSL
EVLVSREDEFSSRLSSRAGFRGCTALHYATLADDPRTVRMLLEAGANPLQSNGLGHTARA
YAKEGEASTVLQEFEGKFQEVQARREAEERRRFPLERRLKEYIIGQEGAINTVASAIRRK
ENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYMHKDVKKGFIRMDMSEFQEKHEVAKFI
GSPPGYVGHEEGGQLTKLLKACPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTI
ECKDAIFIMTSNIASDEIAQHALQLREEAEVVSRRKLADNLEEVQKGDDVKISRQFKESV
IRPILKAHYRRDEFLGRINEIVYFLPFCHSELLQLVSKELNFWAKKAKQRHGINLQWERP
VLDLLAGGYNMHYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLTVQSEDREERSAP
SLRLEVVGEDSTSRTLDIRPPLSPDH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatctgttcccaccaggctcattgcgcgaaggtcgcgcagcctgtcgccgtgc
agccgcgtgctcaagaccagcgcaggcggcgccgcgtgccaggccgtccgccagacaccg
gtggagatcaaccgcaaccccatcgtgtccacctcccgagtctccagaagggggatttta
gctgaagagaccactgctaccagtgtaaccccctcggtgcagtaccaccatatcgcccct
agatggctgtccaacctggagaaccgccgcggctcgtgggcggcgctcgccagcagaggg
cgcaacaataaccagttctgggaggagagcgggcaaagcggtggtggtggtggtggtggt
ggtggtggtggggggagccaggggacaggtggaggagccagccgggcaggagcgacctct
atcgggctgctgtctgcagcagcagtggccttctgcctgaaaaaagattctgataacaag
ggcgatgctcttctggaggcagcgaggtcaaataactctcaagatgtggccaggctggtc
gaagagggggtcgaccctaaccaccgccaccgtctaggctggaccgctctcatggtggct
gccatgaaccgacagcacagcgtgataaaggttctgctggaagccggtgccgacccaaac
accggcgatcacttcaacaacgtttacgacacttcacgagagaaaggcatccactcactg
gaagttcttgtgtccagagaggatgaattcagcagccggctcagcagcagggctggcttc
cgtggttgcacagcacttcactacgccacactagctgatgacccacgcactgtccgcatg
ctgctggaggccggtgccaaccccctgcagagcaatggtttgggacacacagcgcgggcc
tatgctaaagagggagaagcaagcacggtactgcaggagtttgagggcaagttccaggag
gtgcaggctcggcgggaggcggaggagaggcggaggttccccctggagaggaggctgaag
gagtacatcatcggacaggagggagccatcaatactgtggcctcagccatcaggaggaag
gagaatggttggtacgacgaagagcatcctcttgtattcctcttcctcggctcatcagga
atcggaaagacagagttggccaaacaggtggctcgctacatgcacaaggacgtcaagaag
ggtttcatccgtatggacatgtccgagttccaggaaaaacacgaggtggcaaagttcatt
ggctccccgccgggatacgtgggacatgaggaagggggtcagctgaccaagcttttgaag
gcgtgtcccaacgctgttgtcctgtttgacgaagtagacaaagcccaccctgatgttctt
actatcatgctgcagctctttgatgagggtcgcctcacagatggtaaggggaagaccatt
gaatgtaaagacgccatcttcatcatgacgtcgaacattgcaagtgatgaaatcgcccag
cacgcactgcagcttcgcgaggaagccgaggtggtcagccgcagaaagctggccgacaac
ctcgaggaagtacagaaaggcgatgacgtcaaaatctcccgacagtttaaagaatctgtg
attcgaccgatcttgaaggctcattatcggagggacgagtttctgggtcggatcaatgaa
atcgtctacttcctgccattctgtcactccgagctcctgcagctggtcagcaaagagctc
aacttctgggccaagaaggccaaacagcgccatggcataaaccttcagtgggagcgcccg
gttctggacctgttagcgggcgggtacaacatgcattacggtgcacgctccatcaaacat
gaggttgagcggcgggtcgtcaaccagttagcggcagcctacgagcaggaactgctgccc
aaaggctgcaccctgcgtctgaccgtccaatcagaggaccgggaggagcggagcgcgccc
agtctgcgcctcgaggtggtcggagaggacagcacatcgagaacactcgacatccgtcca
ccgcttagccctgatcactag
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