Cyclopterus lumpus (lumpfish): 117741725
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Entry
117741725 CDS
T09199
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117741725 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
clum04091
]
117741725 (frem2b)
Lectins [BR:
clum04091
]
C-Type lectins
Lecticans
117741725 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
Protocadherin
DUF6522
LAX
Motif
Other DBs
NCBI-GeneID:
117741725
NCBI-ProteinID:
XP_034404830
Ensembl:
ENSCLMG00005014804
UniProt:
A0A8C2ZQN2
LinkDB
All DBs
Position
13:9947307..9996147
Genome browser
AA seq
3112 aa
AA seq
DB search
MAWITPPHLHRTGAAFVLLAVILTGDAVAQVFDSYGLSYALRSDPSEDTILVANNGVRVP
FGRSVFIDPINDLVIQLQPGDRCSITVLDNDPLSQRPGHLSPKKFPCEFGPNDVKYSHFG
SRSPPRDRVRLQLRYDTQTDTIIIPFMMEVEVIFTQLEVLTKNMPLTVEKLLSTSNPIDR
RILEFTYDKSAQQCKIASLSSGSVLPRYGKLVDEDSLGTMVDCDEFIKMNIRYQHTFALK
SPNRDYIPMLVELHDKEGNMLKQEFFQMLVRIKDGEENTAPKPSFVAMMMMEVDQFVMTA
ITMDMLAAEDVESNPDELIFNITSTLSFEEGYIVSTDDRNLPITSFCQGDLKDLKIAYKP
PAVDSNTERIFQIEFEVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSRTL
SSSQSLEISDEDSLHNVKITVIDGLRHGELTILGSRRKFFTPADLDAGVVIYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEPPIINANTGLILFKNQMMQISSLMLSAADID
SEDSSIKFTIEPPFSTIGQVLLRQSEAPEDPSTWKFNTEDELYEKVVTEWLQQDITDGKL
FYKHIGPHSISTVIDQFVFGVQDDNDPPNQSSESSFIIKIIPLDDVPPELYPGTTLQMTV
HEYELTYLRKKFLRYTDLDSEDRDLKYKIIQPTTDTDENSPVVLGALVLTEKPNTKVTVF
TQAQINHHKIAYKPPELELGITSHVLQFRYTVEDVSGNIAEGDFTIFLKPVDNTPPQITN
SGFTVFERGTHIFTSDELDTSDTDTDSKQISFTITQPPLHGQIQLTFSDITRGDIFSLDD
IGNGRISYIHNGDESTVDLIQIDVSDGIHIVPITIQISVKPVDDETPTISLPAGTIGSYI
DVLENGATEITSNVIQGRDEDTDDLRLTFIVEDPPSLGEILVKGVPSGTFTQADVINGFV
VYAHTSGEIGLATKDDFFNLTLTDMSDEWTVGGNKITGVRVHVTILPLDSQAPEVFLGPQ
FSVVEGAKNVIQILHISADDADTSNDHLLCTIIVQPTSGYVENISPAPGSEKSRSGTAIS
AFTIKDIIQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPISIIPSNDEKPDIY
MREFVVMEGMNIVVDTPILNGVDADLPSDQLTFIITKSPKHGFIFNQLTTGTIPVSNFTL
DQIREASSIVYEHDDSETTEDSFDIVLTDGKFSVEKTVIVMIIPVDDETPRMAINDGLEV
KIGDVKVINSNVLKATDLDSEDETLTYIVRYGPSQGYLQWVTSGTLQNITVGMNFTQNEV
DQGLIVYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVISKGVSLKEGG
RVTLTTDLLSTSDLNSPDEHLVFTITRAPMRGHLECTDTPGMPISSFTQLQLAGNKVYYI
HTSKDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTVHSLVVTEGENKLITPFE
LTVEDRDTVDHLLKFTVTQIPVHGRLLFNNTQAVTSFSKQDLNENMISYKHDGTESAEDS
FSFTVTDGTHTDFYIFPNTVFETRKPQMMKITVLPVDNGVPQIVVNKGAPTLRVLENGHL
GFVITSKTLKAEDRDSIQNSVTFRITVGPEHGYLINLGKGNATIITFTQAEIYDMNICYV
LRDGDNATNDIFYFSIEDSGGNKLKNQQFRLNWAWISLEKEHYVVDEEVKFLEVVLKRRG
YLGETSFVSIGTTDGTAQNDNDFRGKSQKQVQFNPGQTTATWKVRILSDSEYEVSETFQI
VLSEPVMAALEFPEIVTVEILDPDDESTVFIPSAAYNIEEDIGELLIPVHRSGDVSLELM
VICYTQQVSATGTIPTTVLSYSDYISRPEDHHSILRFDKGEVEKSCRVVIIDDSLYEDEE
SFNVTLSMPMGGRLGSEFPAARITIIPDMEDAPIFYFGNTDSHVDESDGFVEVQVWRTGT
DLSKGGTVTVRSRKTDPVSAEAGVDYVGISRNLDFAPGVTMQTFRVTILDDLGQPVLEGL
EKFELVLRMPMNGILGEPSKATILINDSISDLPKVQFRDAVYVGNENSGQISATVYRSGD
ISYKSTVRCYSRQGTAQVMMDFNERPNTDGSIITFLPGEIEKPCVLVLVDDTEHEEEEEL
RLVLGRPRSESPFGASIGGQNETLVKIKDDADKAIIRFGETKFSVNEPKESGQVSVVKIP
VLRVGDTSKVSVVRVHTKDGSATSGEDYHPISEEIVFKEGDTQHYVDVEIVYDSVREMRE
AFTVHLKPDENMVAETKMSKAIIYIEETNSMADVTFPSVPRVVSLLHYDDIDRTRDAPPV
AGYPVICVTACNPKYPDYDKTGSICVSENINNTLTRYRWLVSAPTSQDGVTSPMREVDFD
TFFTSSKLITLDSVYFQAGSRVQCAARGVNSNRDEGLELSSPIVSISMDEGMCQPRVAGT
VGAEPFTAKLRYTGTEDAEHPNLIKLTVTMPHIDGMLPVVSTRALSNFELTLSPDGTRVG
NHRCSNLLDHAEVKTRYGFLTEATKNPEVIGETSSYQYSTSLRGSSTLRFYRNLNLEACL
WEFTSYYDMSELLSDCGGNIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQHFDL
QSELRLTFVYDTAILWRDGVGSPPEAELQGALYPTSMRINGQGRLVVNFRTEARFRGLFV
FAHPASPLTSMVMCPDHPGLTFNLSLVRNEPTYNQPIQQWTFVSDFAVRDYSGTYTVKLI
TCTSPPSLEYTIPPVCNPREPLTFDMDIRFQQVSDPVAAEFSLNTQMILLSKRTLWLSDG
SMGFGQETDTAFSQGDTIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPSNFE
FGCLADAPSLLYRFKIIDKAQPETQARSFGNVAFDAFLAVDDPGALALVRQPASDGFRID
SSALFQVSAGREWFIHTIYTVRSRDNANRGIGKRSLEYHMMSQHTNTFPKVQHRTRRSAD
GVPDVIEEIGQTNNRGTNILHIALDRSSQQRTSPEREIFTKGIIHRELNQKDNSDDRLVL
IIGIFVGLLLMVLIIIVVVLLVRSKREKKDVPKSSSSAEPMMTQALSDSSEV
NT seq
9339 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattacccccccgcatctgcacaggaccggcgctgcttttgttctgctcgcg
gtgattctgacaggtgatgcagttgcgcaggtttttgacagctatggattatcatacgcc
ttgaggtccgacccgtcagaggacacgatactggttgccaacaatggggtccgcgtgcct
ttcgggagatcagtcttcattgatcccatcaacgatttggttatccaacttcagcccggt
gatagatgcagcataacggtcctggacaatgatcccctgtctcaaaggcctggacatctg
tctccgaaaaagtttccgtgtgaatttggccccaacgacgttaagtattcgcacttcggc
tccaggagccctccgagggatagagtgagattacaactcaggtatgacacccaaacagat
accattataataccttttatgatggaggtggaagtcattttcacacagctggaagttcta
accaaaaatatgccactcactgtcgagaaactgctcagcacaagtaaccccattgataga
agaattttagaattcacttatgataaaagtgcccaacaatgcaaaatagcctctctctca
agtggcagcgtgctgcccaggtatggaaaacttgtggatgaggacagccttggaacaatg
gtggactgtgatgaatttattaaaatgaatattcgttatcagcatacttttgctttgaag
tcgccaaacagagattacattccaatgcttgtggagttacatgataaggagggcaatatg
ctcaagcaggaatttttccaaatgttggtgaggattaaagatggagaggagaacacagct
cctaaacccagctttgttgcgatgatgatgatggaagtagaccagtttgtaatgacagca
ataaccatggatatgctggctgcagaggatgttgagtctaatcctgatgaattaattttc
aacatcacatccaccctgtcctttgaggagggctacatagtgagcacagatgataggaat
ttaccaataacctcattttgccaaggagacctcaaagacttgaaaatcgcctacaaaccc
cctgcagtggattcaaacactgagcggattttccagattgagtttgaggttgtggacaca
gagggggctgtgtcagacccttttgctttcatgattgttgttaaacctatgaacacattg
gcccctgtagtgactaggaatactggccagttgctgtatgagggtcagtctaggactctg
tccagttcacagagtctggaaatcagcgatgaagacagtttacacaatgtcaaaatcact
gttattgatgggctgaggcatggagaattaaccattctaggctcaaggaggaaatttttc
accccagctgacctcgatgctggagttgtcatttatcaacatgatggcagtgacacctac
agtgataatattattttcagaatgacagatggaacaaatgaggtggagtttctgtttccc
atcactgttgtgccaactgatgacgagcctcccattatcaatgccaacactggtttgatt
ttattcaaaaaccaaatgatgcaaatttcctcactcatgctcagtgctgcagatatcgac
tcagaggattcttcaataaaattcacaatagagccccccttttccacgatagggcaggtg
ttgctgcgtcagtctgaggccccagaggacccatcgacctggaagtttaatacagaggat
gaattgtacgagaaagtagtgactgaatggctgcagcaggatataactgatggtaaactg
ttctacaagcacattgggcctcacagcatcagcacagtcatagatcagtttgtgtttgga
gttcaagatgacaacgacccaccaaaccaatcaagtgagagctcattcattataaaaatt
atccctctagacgacgtcccacctgaactttaccccggcacgactctgcaaatgactgtg
cacgagtatgagcttacttacttacgaaagaaattcctccgttacactgacctggactca
gaagatcgagatctcaaatacaaaatcatccagccaacaacagatacagatgagaatagc
cccgttgtattgggagctctggtcttaactgaaaaaccaaacactaaagtcacagttttc
actcaggcacaaattaaccatcataaaatagcctacaaaccgcctgagcttgagcttgga
attaccagtcatgttttgcagtttcggtacactgtggaggatgtttctggaaatattgct
gaaggagatttcactatatttttaaagcctgtggacaacacgccacctcaaataaccaac
tctggattcactgtgtttgaacgcggcacccatatctttacaagtgatgagctggacacc
tcagacacagatacagacagcaaacagatatccttcactattactcagcctccactgcat
ggccagatccagttgacattttctgatattacaagaggagatattttcagcctagatgat
attggaaatggtagaatttcatacatccataatggagatgaatcaactgttgatttgata
caaatagatgtcagtgatggcatccacattgtcccaatcactatacagattagtgtgaaa
ccggttgatgatgagactccaactatcagccttccagctggcacaatcggttcctacata
gatgtactggaaaatggagcaacagaaatcacaagtaatgtcattcagggaagagatgag
gacacagatgacctccgtttgacctttattgttgaggacccaccatcattaggtgaaatt
ctagtgaaaggtgtcccatctggcacattcacccaagctgatgtcattaacggctttgtg
gtctatgctcataccagtggtgagataggcttggccacaaaggatgactttttcaatctc
actttgacggacatgtctgatgagtggactgtaggtggaaataaaatcacaggtgtaaga
gtgcatgtaactattcttcccctggacagccaggctccagaggtgtttctggggccacag
ttctctgttgtggagggagcaaagaatgtcattcaaattcttcatataagtgctgatgat
gcagacacctccaacgatcacctcctttgtacaatcattgtacagccgacttcagggtat
gtggaaaatatctcccctgccccaggctccgagaaatccaggtccgggacagctattagt
gctttcaccatcaaagacatcatacagaatcacatttactatgttcaaagcattcacaaa
ggagtcgagccagtggaggacaggtttactttcagatgctctgatggcatcaatttctca
gaaaggcactttttcccgatatccataatcccctctaatgatgaaaagcctgatatttat
atgagagagtttgtagttatggagggcatgaacatagttgtcgacactcccattctgaat
ggtgttgatgcagatctcccctctgatcagctcacattcattattactaaatcccccaag
cacggatttattttcaatcagctcactactggcactatccctgtctcgaacttcaccttg
gatcagatcagggaggcctccagcattgtgtatgagcatgatgactcagagaccacagag
gacagctttgatattgttctcacagacggaaagttcagtgtagaaaaaacagtaatagtt
atgattatccctgtggacgatgagactccaaggatggcaatcaatgacggccttgaagtt
aagataggtgacgtgaaggtcataaacagcaatgttttaaaagcaactgatctggactct
gaggatgaaacgctaacttatattgttcgctatgggcccagtcagggatatttacagtgg
gtaacttctgggactttgcaaaatattacagttggaatgaattttacacagaacgaagtg
gatcagggtttaattgtgtacatccataatggacaagagggaattcgggacctcatcaaa
tttgatgtaacagatggcatcaatccactgatagacagatacttctatgtcacagtgggt
ggtattgacatggttttcccagacgtgatcagtaaaggtgtatcacttaaagagggtggc
agggttactctgacaacagacctgctcagcaccagtgacctcaacagcccagatgaacac
ttggttttcacaatcaccagagctcccatgagaggacacctggagtgcacagacacacct
gggatgcccatctcatccttcacacagctccagctggctggcaacaaagtatactacatc
cacacctctaaagatgaagttaaaatggatagctttgaatttgaagtgactgatggctac
aaccctgtgtttcgcactttccgcatctccatcactgacgtggacaataaaaagcctgta
gtgacagtacacagcttagtggtaactgagggagagaacaaactcatcacgccttttgag
ctaacagtggaggacagagacactgttgaccacctcttgaagttcacagtcactcaaatc
ccagttcatggtcgtctgctctttaacaacacccaagctgttacatccttctcaaagcag
gacctgaatgagaacatgatcagctacaagcatgatggcacagagagtgcagaggacagc
ttctccttcaccgtcactgatggcacacacacagacttctacatctttcccaacacagta
tttgaaactcgaaagccccaaatgatgaagattactgttctaccagtggacaatggggtg
ccgcagattgtggtgaacaagggagccccaacattgcgggttctggagaatggtcacctg
gggtttgtgatcaccagtaagactctcaaagcagaggacagagacagcattcagaattct
gtgacctttaggattacagttggcccagaacacggctacctgatcaacctcggcaaagga
aatgccactatcatcaccttcacacaagctgaaatttacgacatgaacatatgctatgtt
ctgagggatggtgacaatgctacaaatgacatcttctatttctccattgaggacagtggt
ggcaacaaactgaagaaccaacagttccgtttgaactgggcttggatctctttagagaag
gaacactacgtggtggatgaagaggtcaagttcctggaagtggtgctgaaacgtcggggc
tacctgggggagacttcattcgttagtataggcacaacggatggcactgcacaaaatgac
aacgattttcgagggaaatctcagaaacaggtgcagttcaacccaggccagaccacagcc
acctggaaggtgcggatcctgtcagatagcgagtacgaagtgtcagagaccttccaaatc
gttttgtctgagccagtgatggccgccctggaattcccagagattgtcactgtagagatc
ctggacccggatgatgagtcaacagtgttcataccctcagccgcatacaacatagaggag
gacattggggagctgcttatcccagtgcacaggagtggagatgtcagcctggagctgatg
gtcatctgctacactcagcaagtttcagccacaggcaccatccccaccacagtgctgtcc
tactctgattacatctccaggcctgaggaccatcacagcatcctgcgcttcgacaaggga
gaggtggagaaatcctgccgggtggtgatcattgatgactccctgtacgaagacgaggaa
agcttcaatgtcaccctcagcatgccgatggggggccgtctgggctcagagttccccgct
gctcgaatcacaatcatccccgatatggaagacgctcccatcttctacttcggcaacaca
gactcccacgtggatgagagcgatggctttgtggaggtgcaggtatggaggacggggact
gatctctccaaaggaggaaccgtcacagtgcgctccagaaagacagatcctgtctcagct
gaggctggtgtggattacgttgggatcagccggaatctggattttgcaccgggggtcacc
atgcagacatttcgtgtgaccatcctggatgacctgggtcagccggtgctggaggggcta
gagaagtttgaactggtgctccgtatgcctatgaatgggatactcggagagccgagtaag
gctaccatcctcatcaatgactcgatttcagacctgcccaaggtgcagttccgtgatgcc
gtgtatgtaggcaatgagaactcagggcagatctcagctactgtttaccgaagtggagat
atcagctacaagtccacagttcgctgttacagcagacaggggacagcccaggtcatgatg
gacttcaatgagaggcccaacacagatggttccatcatcaccttcttaccaggagagatt
gaaaagccgtgtgtactggtactagttgatgacacagaacatgaggaagaagaagagctc
cgacttgtgttgggaagacccaggagtgaatctccatttggagcatctattggagggcag
aatgaaacactcgtcaagataaaagacgatgcagacaaggcaattattaggtttggagag
accaaatttagtgtgaatgagccaaaggaaagtggccaagtgtctgtggtgaagatccca
gtgctgcgtgttggagacacctccaaagtctctgttgtccgagttcacacaaaggatgga
tctgctacgtctggagaggactaccatcccatatctgaggaaattgtgttcaaagagggt
gacacacagcactatgtggatgtggagattgtatatgacagtgtcagagaaatgagggag
gcgttcactgtgcacctaaagcccgatgagaacatggtggcagagacaaagatgagcaaa
gctataatctatatcgaggagaccaacagcatggcggatgtgaccttcccctcggtgccc
agagtggtttctctgttgcattacgatgacatcgacaggacgagggacgctccccctgtg
gccggataccctgtcatttgtgtcactgcctgtaatcccaagtacccagactatgacaag
acaggctccatctgtgtaagcgagaacatcaacaacaccctaacgcgttaccgttggctc
gttagcgcccccaccagccaagatggtgtcacaagcccaatgagggaagtagactttgac
accttcttcacctcctccaagctcatcactctggattcagtctactttcaggctggttcc
agggtccagtgtgccgcaaggggcgtgaactctaacagggatgagggtctggagctcagt
agccccatagtgtccatcagcatggatgagggaatgtgccagcctcgtgttgcaggcaca
gttggggccgagcccttcactgccaagctgcggtacactggcacagaagatgcagaacac
cccaacctcatcaaactaactgtgaccatgccccacattgatggcatgttacctgtagtg
tccacccgagccctgtccaactttgagctcacgctgagcccagacggtacccgtgttggc
aaccatcgctgctccaatttgttggaccacgctgaggtcaagactcgctacggcttcctt
actgaagccactaaaaatccagaagtgatcggcgagacgtcctcttaccaatacagcact
tccctcaggggatccagtacactgcgattctacagaaacctcaatttggaagcttgtttg
tgggaattcaccagctactacgacatgtctgagctgctcagtgactgtggaggcaacatt
gggactgatggacaggtgttgaatctggtccagtcctatgtgacactacgagtaccgctc
catgtgtcctatgtcttccattcccctgtgggagcaggaggatggcagcactttgattta
cagtcagagctgaggctcacttttgtttacgacactgccatcttatggcgggatggtgtc
ggtagcccaccggaggctgaactacaaggtgccctgtacccaaccagcatgcgtataaat
ggccagggacgactagtagtcaacttccgcactgaggctcgattcagaggcctgtttgtg
tttgcacatccagcttcaccactgacctctatggtcatgtgtcctgaccaccctggtttg
acctttaacctcagtcttgtgagaaatgagccaacctacaaccagcccatccagcagtgg
acatttgtctcggattttgctgtgcgtgactactctggcacgtacacagtgaagctgatc
acctgcacatcccctcccagcctggagtacaccatccctcctgtttgcaaccccagagag
ccgcttaccttcgacatggacattcgctttcagcaggttagcgaccccgtggctgctgag
ttcagcctgaacacgcagatgatcttactctctaagcggacgctctggctctcagacggc
tccatgggcttcggacaggagaccgacactgccttctcacaaggggatacgatttacgga
agagtaatggtggatccagtgcagaacttgggcgactccttcatttgtaacatagagaaa
gtcttcctgtgtactggcgctgatggttatgtccctaaatacaaccccagcaactttgag
tttggctgtctggctgatgccccatcactactctacagattcaagataattgacaaggcc
cagccagagacccaggcccggtcatttggtaatgtagctttcgatgccttcctggcagtg
gatgaccccggcgctttagctctagtaagacagcctgcgtcagatggtttcagaattgat
tcctcagctctcttccaggtatctgcagggagagagtggtttattcacaccatctacact
gttcgttcccgggacaacgctaaccgtggcatagggaagagaagcctggagtaccacatg
atgagccagcacacaaatacctttccaaaggttcaacatcgcaccagaagatcagccgac
ggtgtgccagacgtaatagaggagatcggtcagactaacaatcgtggcaccaacatcctt
cacatcgctctggaccgcagcagccagcagaggacgagcccggagagggagatcttcacc
aaagggatcatccatcgtgagctcaaccagaaagacaacagtgatgacagactagtgttg
atcattggtatctttgtcgggctgctcctcatggttctcatcatcattgtggtggtgctg
ctggtccggtccaagcgagagaagaaagatgtacctaagagctccagcagcgcagaaccc
atgatgacacaagccctcagtgacagctcggaggtctaa
DBGET
integrated database retrieval system
