Cyclopterus lumpus (lumpfish): 117741800
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Entry
117741800 CDS
T09199
Symbol
stat1a
Name
(RefSeq) signal transducer and activator of transcription 1a isoform X1
KO
K11220
signal transducer and activator of transcription 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04217
Necroptosis
clum04620
Toll-like receptor signaling pathway
clum04621
NOD-like receptor signaling pathway
clum04625
C-type lectin receptor signaling pathway
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117741800 (stat1a)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117741800 (stat1a)
04621 NOD-like receptor signaling pathway
117741800 (stat1a)
04625 C-type lectin receptor signaling pathway
117741800 (stat1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117741800 (stat1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117741800 (stat1a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
117741800 (stat1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAT_alpha
STAT_bind
STAT_int
STAT_linker
STAT1_TAZ2bind
SH2
SecM
CC_Liprin_beta
Retrotran_gag_2
FliT
DUF3450
Motif
Other DBs
NCBI-GeneID:
117741800
NCBI-ProteinID:
XP_034404918
Ensembl:
ENSCLMG00005003533
LinkDB
All DBs
Position
2
Genome browser
AA seq
752 aa
AA seq
DB search
MAQWDQLKMLDCKYLEQVDQLYDDSFPMDIRQYLSKWIESIDWDTVAYQDSLATVRFHDL
LTQLDDQHGRFALNNNFLLQHNIRKIKRNLQDRFQEDPVHMAMVISRNLKEEKKILENAK
NTKQESEGAVSAMVVEKQKLDNKVKDMKDRVQVADQYIKNLEDLQDEYDFKVNNLKNREN
EVNGMTPKELETEKMTLMRMCLDLKTKRQEAVGQLNDLLTATQALLADLISEELPEWRQR
QQIACIGGPPNACVDQLQSWFTSAAESLQQVRQHLKKLQELEQKFTYDDDPIAQKKAYLE
ARALDLLKDLLSNSLVVERQPCMPTHPQRPLVLKTGVQFTVKLRFLVKLQEFNYQLKVKA
LFDKDVTEKKGFRKFNILGTNTKIMNMEESNGSLAAEFRHLQLKEQKVAGNRTNEGPLIV
TEELHSLSFESELQLNQSGLNIKLEAISLPVVVISNVCQLPSGWASILWYNMLTTEPKNL
KFFLKPPLAKWSQLSEVLSWQFSAVTQRGLNQEQLSMLADKLLGAKAKRNPEGQIPWIKF
CKVESANEKAFPFWLWIEGILDLIKRHLLSLWNDGSITGFLSKEREKALLSDKCPGTFLL
RFSESSRDGAITFTWVEHDVHDKPLFHSVEPYTKKELSAVSLADIIRTYKVMAVENIPEN
PLRFLFPDIPKDKAFGKYYPKPSETPEPMDVENGPKEYGYMKTELISVSEVHPSRLQDKM
MPMSPDDFKELSQYVSPRDIDAVMSEEFSDQN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtgggaccagctcaagatgctggactgcaagtacctggagcaggtggaccag
ctgtacgacgactcgttcccaatggacatccggcagtacctgagcaagtggatcgagagc
atcgactgggacacggtggcgtaccaggactctctggccaccgttcgattccacgacctc
ctcacgcagctggacgaccagcacggccgcttcgccctgaacaataacttcctgctgcag
cacaacatccgcaagatcaagaggaacctgcaggaccggttccaggaagacccggtccac
atggccatggtgatctccaggaacctgaaggaggagaagaagatcctggagaatgccaag
aacaccaagcaggagagcgagggcgcggtgtcggccatggtggtggagaagcagaagctg
gacaacaaagtgaaggacatgaaagaccgagttcaggtggcggatcagtacattaagaac
cttgaagatctgcaggacgagtacgacttcaaagtcaacaatctgaaaaacagagagaac
gaggtgaacggcatgacgccgaaggagctggagactgagaagatgacgctcatgaggatg
tgcctggacctgaagaccaaacgccaggaggcggtggggcagctcaacgacctgctgacc
gccacgcaggcgctgctggccgacctgatctcagaggagctgccggagtggaggcagcgg
cagcagatcgcctgcatcggagggccgcccaacgcctgtgtggaccagctgcagagctgg
ttcacgtcggcagcagagagcctccagcaggtccgtcagcacctgaagaagctgcaggag
ttggagcagaagttcacgtacgacgacgaccccatcgcccagaagaaagcgtacctggag
gcccgagccctggacctcctcaaggacctcctctccaactctctggttgtagagaggcag
ccctgcatgcccacccaccctcagagacctctggtgctgaaaacaggcgtccagttcaca
gtgaagctccgcttcctggtgaagctgcaggagttcaactaccagctgaaggtcaaggcc
ctgtttgataaagacgtgacggagaagaaagggtttcggaagttcaacattttgggaaca
aataccaaaatcatgaacatggaggagtcgaacggcagcctggcggccgagttcaggcac
ctgcaactgaaggagcagaaggtcgccggcaacaggaccaatgaggggcctctgatcgtc
accgaggagcttcactcgctgagcttcgagtccgagctgcagctcaaccagtcgggactc
aacatcaagctggaggccatttctctgcccgtcgtggtcatctccaacgtgtgccagctg
cccagcggctgggcctccatcctctggtacaacatgctgaccaccgagcccaagaacctg
aagttcttcctcaagcctcctctggccaagtggtcccagctctctgaggtcctcagctgg
cagttctccgccgtcacccagcgaggcctgaaccaggagcagctcagcatgctggctgac
aagctgctgggagccaaagccaagaggaacccagagggacagatcccctggatcaagttc
tgcaaggtggagagtgccaatgagaaagcgttccccttctggttgtggatcgaggggatc
ctggacctgattaagagacacctgctctccctctggaacgacggctccatcacaggcttc
ctcagcaaggagagggagaaggctctgctgagcgacaagtgtccaggaaccttcctgctg
cgcttcagcgagagcagccgggatggagccatcaccttcacctgggtcgagcacgacgtg
cacgacaagcctctgttccactccgtggagccgtacaccaagaaggagctgtccgccgtc
tccctggccgacatcatccgcacctacaaggtgatggcggtggagaacatcccggagaac
ccgctccgcttcctcttccccgacatccccaaagacaaggccttcgggaagtactacccc
aaaccctcagagaccccggagcccatggacgtggagaacggtccgaaggagtacggctac
atgaagacggagctcatctccgtctcagaagtacatccgtccagactgcaagacaagatg
atgccgatgtctcctgacgacttcaaggagctgtcgcagtacgtcagccccagagacatc
gacgctgtgatgagtgaagagttttcagaccagaactga
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integrated database retrieval system
