Cyclopterus lumpus (lumpfish): 117741827
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Entry
117741827 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117741827
03012 Translation factors [BR:
clum03012
]
117741827
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117741827
mRNA cycle factors
Stress granule specific factors
117741827
Translation factors [BR:
clum03012
]
Eukaryotic type
Initiation factors
eIF-4
117741827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
117741827
NCBI-ProteinID:
XP_034404948
LinkDB
All DBs
Position
13:18508746..18626946
Genome browser
AA seq
2060 aa
AA seq
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MNKAPQPITGPPSIPHPAPSPGLSQPSFPPGQPPSVVFATPPPPQMNPAPQPRQFAPGPR
PMHQQGSFRSLQPYYTNRATLPPSSGPRGVPPNSGPRPVTPTHVYQPGPGSQMMMIPGQQ
LPFPSSPQGPAYFIPGQYRSATYVATPQQYPVPAGTPGFYPTTNTAEYGTYAGAYYPAQA
QFTPSVQAAPVIMNPAPQQQPQPPPQPPQHISTKRERKQIRIRDPNQGGRDITEEIMSGG
RSGSTPTPPQTAISESTAVVQSNGESITAAVTLVRPDDRGKPTSPPPSKTPELAKGNPAP
AKASSSDTNTKPRASPLPSEDTIPSPAPSVPVADVMDAPRKATPTPQSAPEVPAYPAPLP
DPVSAAQDKTDKRTAEAKREEVKEEVANAATAAAAASLAPPPSATNGVAEPERPSVAAPS
CHPEAPLESPIAQPEELRLPNGLPLPAPRDPEVPAAGSTERDDSPIAEPDVGEERVTRTS
RAVMQVTPKAVTQAPPKAVTQAPPKAVTQAPPKAVTQAPPKAVTQVTTKAVTQAATKAVT
QVTPKAVTQAPPTAVAQTAPRAVIQATPTAVNQVTPTAVNQMTPTAVTQAAATAVSRASP
TAVTQAVPTAVTQAAPTAVTQAAPTAVTQAAPTAVTQAPPKAVTQAPPKAVTQAPPKAVT
QAPPTAVTQAVPTAVTQAAPTAVTQAVPTAVTQAVPTAVTQAAPTAVTQAAPKAVTRVAP
EPVTRVAPELVTEAAPTAAAPTAAAPTAAAPTAVTQAPPTAVTQAPPTAATQAPPTAAIQ
APPTAASQAPPTPVVEAAPTSAEQPAPAVQEIPESPAVEAAAPAEPEVKDTAPPVAPDIK
EDATVPLSSAEETPSPAEETVSTADVAPAAVPAAPSPTAEEREDTPPPQAVTPALVEATM
QAAVSVPKKKRKMKDLNKKEAVGDLLDAFKEEQVVSPPEPKPAPAPETKPPAATPPAPED
PDLTWEDKEDKEGKLAAEKIQPNADKKYQYKEEQWKPINSEDKKHYDREFLLGFQYSSAS
MNKPEGLPAISDVVLDQANKTPLRQMDLSRLQAMTCGPDFTPSFANLGRPGMGSGGGGGG
GGGGGGGGVERERGGERGGSGGRGPPPGMGMGIGGPRRSQQLPRKEVRKFITTMSLGEDV
QLXKAEKAWKPSAKKAVRGPSAAEEPEESDSGDRQDRRLFKRVRSILNKLTPQKFQQLMK
QVTELTIDTEERLKGVIXLTFEKAISEPDFSVAYANLCRCPHGGKTFLKVETTDNPETTV
NFRKLLLNRCQKEFEKDKDDDEIFEMKQKELDAASVPEEKQRLTVELQQAKDIARRRSLG
NIKFIGELFKLKMLTEVIMHDCIVKLLKNHDAESLECLCRLLSTIGKDLDFEKAKPRMDQ
YFNQMEKIIKDKKTSSRIRFMLQDVIDLRRNNWVSRRGDQGPKTIDQIHKDAELEEHREQ
MKVQQALIYKKDPGPGGRMGGGGGGGGGGGGGGRGGSHNPGRGAPPQDEGWNTVPISKNR
PIDTSRLSKITKTPVLDFNNQLLAPGGKGTWGSWGKGSSGGTTAKPAETGPEPGGRPTTS
TVNRFSALQQQSAASSGPAQDSDRRVPQRNSSSRERGDRGFDRDRNRLQITKRSFSRETE
ERSRDREQRGSADPVRRVASMTDDRGSRDRARSKENVKREKAATPPPPPTPTKPALTEEE
LSKKSTAIIEEYLHINDMKEALQCLQEMNSAQLLFVFVRNGMESTLERSTIVRERMGLLL
QQLIKGNILQRQQYYNGVQEILEVAEDMSIDVPHIWLYLAEQITPMLHEGGIPMGDLFRE
ISKPLIPQGQAGVLLVQILTLLCKGMSHKKAGAMWREAGLRWKDFLPEDDDVNKFVTEQN
VEFTLGDDSEDKEEEGESKKKELSSAELTKQLERLIQDQADDQRIFDWVEANLDEQQTSS
NMFVRALMTCVCQSAVVCENPNKVDGERIKERAVVLHKYLKDEQKELQALYALQALMVQL
EQPANLLRMFFDALYDEDVIKEEAFYKWESSKDPAEQQGKGVALKSVTAFFTWLREAEDE
SRDLNRDREPTIRFKSGRKK
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccacagcctataacaggacccccctccatcccccaccctgccccctcc
cccggcctgtcacagccctcattcccccctgggcagcccccttctgtcgtgtttgccacc
ccaccgcctccacaaatgaaccctgcaccacaaccccgacagtttgccccagggccccga
cctatgcaccaacagggaagcttcaggtcgctacagccctattacaccaacagggccacc
ctgccacccagcagcgggcctcggggtgtccctcccaacagcggcccccggcctgtgacg
cccacccacgtctaccagccgggccccggctctcaaatgatgatgatccccgggcaacaa
ctgcccttccccagctcgccgcagggacccgcctacttcatacctggacagtaccggtcc
gcaacctacgtggccacacctcagcagtacccggtcccggccggcaccccaggcttctac
ccgaccaccaacaccgctgaatatggtacttatgcaggggcctactaccccgcccaggcc
cagttcaccccctcggtgcaggcggcacccgtcatcatgaacccggccccccaacagcag
ccgcaaccaccacctcagcccccccaacacatctccaccaaacgggaacggaaacagatc
agaataagagacccgaaccaaggaggtcgagacatcacagaggagattatgtccgggggc
cgcagtggctctaccccaaccccgccacagacagccatatcagaaagtacagcagtggtt
cagtccaacggtgagagcatcacagctgctgtcacactggtcagaccagatgacagaggg
aagcctacgtcccctcctccgtcaaagacccctgaacttgcgaagggaaaccccgccccc
gcaaaggcgtcctcctctgacacgaacactaagccccgcgcctcccctcttccatcagaa
gacactattccgtcgcccgcacccagcgtgccggttgcggatgtgatggatgctcccagg
aaagccaccccgaccccgcagtcggcgcccgaggtgcccgcctaccctgcgcccctcccc
gaccccgtctccgccgcacaagacaaaacggacaagagaaccgcagaggcaaagagggaa
gaggtaaaagaggaggtggctaacgcagcaaccgccgccgccgccgcctctctggctccg
cccccctccgccactaacggcgtcgcggagccggaaaggccgtcggtcgcggcgccgtcc
tgtcacccggaggcccctctggagtctcccattgcacagccggaggagctccgcctcccc
aacgggctgccgctgccggcccctcgagaccccgaggtgcccgccgccggctcgacggag
cgcgacgacagccccatcgccgagccggacgtcggcgaggagcgcgtcacgcgaacctcc
agggccgtcatgcaggtgacgcctaaagccgtcactcaagcgccgcctaaagccgtcact
caagcgccgcctaaagccgtcactcaagcgccgcctaaagccgtcactcaagcgccgcct
aaagccgtcactcaggtgacaactaaagccgtcactcaagcggcgactaaagccgtcact
caggtgacacctaaagccgtcactcaagcgccgcctacagcagtagctcaaacggcacca
agggcagtcattcaagcgacgcctacagccgtcaatcaagtgactccgacagccgtcaat
caaatgacaccgacagccgtcactcaagctgcagctacggccgtcagccgggcttcgccg
acagccgtcactcaagcggtgcctacagccgtcactcaagcggcgcctacagccgtcact
caagcggcgcctacagccgtcactcaagcggcgcctacagccgtcactcaagcgccgcct
aaagccgtcactcaagcgccgcctaaagccgtcactcaagcgccgcctaaagccgtcact
caagcgccgccgacagccgtcactcaagcggtgcctacagccgtcactcaagctgcgcct
acagccgtcactcaagcggtgcctacagctgtcactcaagcggtgcctacagctgtcact
caagcggcgcctacagccgtcactcaagcggcgcctaaagccgtcactcgggtagcgcct
gagcccgtcactcgggtagcgcctgagctcgtcactgaagcagcgcctacagctgcagcg
cctacagctgcagcgcctacagctgcagcgcctacagccgtcactcaggcgccgcctaca
gccgtcactcaggcgccgcctacagccgccactcaggcgccgcctacagccgccattcag
gcgccgcctacagccgcctctcaggcgccgcctacgcccgttgtcgaagctgcacccacc
tctgctgagcagcctgcgccggccgtccaggagatccctgagtctccggcggtcgaagcg
gcagcacccgccgagcccgaggttaaagacacggctcctccggtcgccccggacatcaaa
gaagacgccacagtgcccctctcttccgcggaggagacgccgtctcccgcggaggagacg
gtttccacggccgacgtcgcgccagcggcggtgcccgctgccccctctcccacagcagag
gagagggaggacacgcctcctccccaggcggtcacacctgccctcgtagaagctactatg
caagccgccgtgtctgtgccaaagaaaaagaggaagatgaaggatctgaacaaaaaggag
gcagtgggagacctcctggatgcctttaaagaggagcaagtggtgtctccaccggagccc
aagccggcccctgcaccagagaccaagccccccgccgctacccctcccgccccggaggac
cccgacctgacctgggaggacaaggaggacaaggagggcaagctggccgctgagaagatt
cagcccaacgccgacaagaagtaccagtacaaagaagaacaatggaagccgatcaactcg
gaggataagaagcattacgacagagagttccttctgggcttccagtacagctcggccagc
atgaacaagcccgagggtctaccggccatcagtgacgttgtcctggaccaggctaacaag
acccctcttcgtcaaatggacctcagtcgtctacaagcaatgacctgcggccccgacttc
acgccctcctttgccaacctcggcagacctggaatgggaagtggaggaggaggaggagga
ggaggaggcggcggcggaggaggagtagaaagagaaagaggaggagaaagaggaggcagt
ggtggccgaggaccgcccccgggtatgggcatgggtatcggcggcccgcgtcgctctcag
cagttgccccgcaaagaggtgcgtaaattcatcaccaccatgtcgctcggcgaagacgtg
cagctgnacaaggcggagaaggcctggaagccctcggccaaaaaggccgtgcgcggcccc
agcgccgccgaggagcccgaggagagcgactcaggagatcgccaagacaggagactgttc
aagagggtccgcagcatcctcaacaagctgaccccccagaagtttcaacagctcatgaaa
caggtgacggagctgaccatcgacaccgaggagaggttgaaaggagtcatcngtctcacc
ttcgagaaggccatctccgagccggacttttcggtggcctacgccaacctgtgccgctgc
cctcatgggggtaagacgtttctcaaagtcgaaaccacagataacccggaaaccactgtg
aacttccgcaagctgctgctaaaccgatgccagaaggagtttgaaaaggacaaagacgac
gacgagatctttgagatgaagcagaaagagctggatgccgcctcagtgccggaggagaag
cagcggctcaccgtggagcttcagcaggctaaagacatagccaggaggcgctcgctgggc
aacatcaagttcatcggcgagctgttcaagctcaaaatgctcacggaggtcatcatgcac
gactgcatcgtgaagctgctcaaaaaccacgacgccgagtccctggagtgcctgtgcaga
ctgttgtccaccatcggcaaggacctggactttgagaaggccaagcctcgtatggaccag
tacttcaatcagatggagaagataatcaaggataagaagacctcctccaggatccgcttc
atgttgcaggatgtgatcgacctccgacggaacaattgggtgtcccggcgaggcgaccag
ggccccaagaccatcgaccagatccacaaagacgccgagctggaggagcaccgggagcaa
atgaaggtgcagcaggccctcatctacaagaaggacccgggccccggaggccgcatgggt
ggtggaggaggaggaggtggaggaggaggtggtggaggtcgcgggggctctcacaacccc
ggccggggcgcccctccccaggacgagggctggaacacggtgcccatctccaagaaccga
cccatcgacacctctcgccttagcaaaatcactaagactcctgttctcgacttcaacaat
cagctgctcgcccccggcggtaaaggcacctggggcagctggggaaagggcagcagcggc
ggcaccacggccaaacctgcagaaactggcccggagccaggcggccgtccgaccaccagc
acggtgaacaggttctcggccttacagcagcagtcggcggcgtcctcgggcccggcccag
gactcggaccgacgggttcctcagaggaacagctcgagtcgagagcgcggcgatcgcggc
ttcgaccgcgaccgaaaccgcctgcagatcaccaagcgcagcttcagccgggagacggaa
gagcggagccgggaccgagagcagcgcggctcggccgatcccgtccgccgggtggcgagc
atgacggacgaccgaggcagccgggaccgagccaggagcaaagagaacgtaaagcgggag
aaagccgcgacccctccgcctcccccgacccccaccaagcccgccttgaccgaggaagag
ctgagcaagaagtccacggccatcatcgaggagtacctccacatcaacgacatgaaggag
gctctgcagtgtctgcaggagatgaacagcgctcagctgctcttcgtgttcgtgcgaaac
gggatggagtcgacgctggagcgcagcaccatcgtcagggagcgcatggggctgctcctg
cagcagctcatcaagggcaacatcctccaaaggcagcagtactacaacggggttcaggaa
atcctggaggtggctgaagacatgtcgatagacgtcccccacatctggctgtacctggcg
gaacagatcactcccatgctccacgagggaggcatccccatgggagacctctttagggag
atttcaaagcctctgatccctcagggtcaagctggagtcctgctggtccaaatcctcact
ttactctgcaaaggaatgagtcataaaaaggcgggcgccatgtggagggaggccggcctc
cgatggaaagacttcctccccgaagacgacgacgtcaacaagtttgtgacggaacagaac
gtcgagttcacgctcggcgacgactccgaggacaaagaggaggagggggagagcaaaaag
aaggagctgagctctgcagagctgaccaagcagctggagagactgatccaggaccaggcc
gacgaccagaggatctttgactgggtcgaggccaacctagacgagcagcagacctcctcc
aacatgttcgtcagagccctgatgacctgcgtctgccagtcggcggtcgtctgcgagaac
cccaacaaggtggacggcgagcggatcaaggagcgcgccgtggtgctgcacaaatacctg
aaggacgagcagaaggagctgcaggctctgtacgccctgcaggccctgatggtgcagctg
gagcagcctgccaatcttctgcggatgttcttcgacgccctttacgacgaggacgtgatc
aaggaggaggccttctacaagtgggagtcgagcaaagaccccgccgagcagcaggggaag
ggcgtggccctgaagtccgtcaccgccttcttcacctggctgcgcgaagccgaggacgaa
tctagagacctgaacagagaccgggagccgacaatcaggtttaagagcgggaggaaaaaa
taa
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