KEGG   Cyclopterus lumpus (lumpfish): 117741894
Entry
117741894         CDS       T09199                                 
Symbol
robo1
Name
(RefSeq) roundabout homolog 1
  KO
K06753  roundabout, axon guidance receptor 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117741894 (robo1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117741894 (robo1)
Cell adhesion molecules [BR:clum04515]
 Immunoglobulin superfamily
  ROBO family
   117741894 (robo1)
SSDB
Motif
Pfam: I-set Ig_3 Ig_2 ig fn3 V-set C2-set_2 Ig_5 Pur_ac_phosph_N FN3_DSCAM-DSCAML_C Unc5_NetrinR_N Ig_C17orf99 Ig_PDGFR_d4
Other DBs
NCBI-GeneID: 117741894
NCBI-ProteinID: XP_034405041
Ensembl: ENSCLMG00005005877
LinkDB
Position
13:8857221..8978570
AA seq 1664 aa
MMSPTSIGFVLLLGVVHVCSGSRLRQEDTAPRIVEHPSDLIVSKGEPATLNCKAEGRPTP
TVEWYKDGERVETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAV
SHNASLEVAILRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGTNIDDRDER
ITIRGGKLMITNARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPSSQVVLVDQ
SVEFRCEARGDPVPTVRWRKDDGDLPKGRYEIREDHTLKIRRLTSADVGSYSCVVENMVG
KAEASATLTVHVMSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLF
SYQPPQPSSRLSVSQSGDLTITDAERSDMGYYSCQAINTAGSVLTKALLEITDVISDRPP
PVIRQGPTNQTVAVDGTVVLNCMATGNPTPTILWRKDGVLVSTHDSRVKQLDTSALQIRY
AKLGDTGTYTCIASTPSGEASWKAYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTR
TSISLSWRPNLNAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLV
RAANAYGLSDPSPITESVKTQDIPPTSQGVDHRQIQTELGEVLIHLHNPTILSSSSVRVQ
WTVEQQSQYIQGYKVMYRPSPEGLQRSEWAVFEVRTPGEDSAVVPQLRKGVAYEFKIRPF
FNEFQGTDSDVKIGKTLEEAPSAPPREVTVAESGDNGTAIVVSWQPPPEEEQNGVVQEYK
IWCLGNESRFHINRTVDGSALSVLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDAS
GRMTETVDQENPLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYA
GIRKVPSFTFTPTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSMN
CCTAGNGNSDSNLATYSRPADCIANYNSQMENKQTNLMVPESGVYGDIDLSNKINEMKTF
NSPNLKDGRFVGPGGQPTPYATTQLIQSSIMGNNVNSDRGTGGSGGGLMGGGEMNEKHSW
KPTSVQQQKQELASQLQYNIMEQNKLNKDRYRGGDGPMPATIPYNQTHDSHTGGSYNSSD
RGSSSTSGSQGQKKGVRTPKLPKQSTMNWADLLPPPPANPPPSRSAEEYSLSMEESCEPD
MQCPMPPSHMYLQPDELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQ
PMLQDALDSHERRRHTVSPPAPPRPHSPSHTYGYITSPLALDTDGMEEEEEDDILEEEEE
EGDETDAEVAKMHYHHTHPHTHPHHPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMING
WGSASEEDNVSSGRSSAVSSSDGSFFTDADFAQAVAAAAEYSGIRVATYPNTLGHEVAGA
SARKYQINPPSHRPGSPVSTDSNMSMAAVHRRPPKKQKQHPAGHPAGHPAGHPGNQRREA
YNEDLPPPPIPPPAGLKSPTHPSKAVLDGRGVISPKAGEGRDKRGGTGGYRPREGSDPRN
SSSERKDPQERQKTAHGGKGNKHEGSSANKARQHPGSEDILPYSRPQFPTVNSPRDPSSS
SSMSSRGSGGRRRGEGGRRNPADMGLNTTGAFQPGDEELEMVES
NT seq 4995 nt   +upstreamnt  +downstreamnt
atgatgtctccaacttctattggatttgtacttttgttaggagttgtccatgtgtgttca
ggatcccgtctgcgccaagaggacactgcaccccggatagtggagcatccatctgacctg
attgtctccaagggggagcccgccactctcaactgcaaagcggaggggcggccgaccccg
acagtggagtggtacaaggatggagagcgggtggaaacggacagggacaatccccgttct
cagcgcatgctgctaccaagcggctccctcttctttctacgcatcgtccacggacgacgg
agcaaaccggacgaaggctcctatgtctgtgttgcccgcaactacctgggagaggcagtg
agccacaacgcctcgctggaagtagccattctacgtgatgacttcagacaaaaccctgca
gatgtgattgtggcagcaggagagccggcggtgctggagtgtcagcctccacgtggacat
cccgaacccacgatatcatggaaaaaagatggaacaaatatcgacgaccgagatgagaga
atcactatacgcggagggaagctgatgatcacaaatgcccggaagagtgacgctgggaag
tatgtgtgcgtcggcacaaacatggtcggagaacgtgaaagtgaaatcgctgaacttaca
gtgcttgagcgtcccagctttgtacgtcgcccgagcagccaggtggtgttagtggaccaa
agtgtagagttcaggtgtgaggcccgtggtgacccagttcccaccgtgcgctggaggaaa
gacgacggtgacctgcccaaaggaagatacgagattcgtgaggaccacaccctgaagatc
cgccgtctgacctcagctgatgtcggctcttactcctgcgtggtggagaacatggtgggc
aaggcggaggcatcggccacgctcaccgtccacgtcatgtctgtgcccccggcatttgtg
gtgagaccaaggaaccaggtggttggggttggcagaactgtcaccttccagtgcgaggcc
accggaaaccctcagccagccattttctggcagcgggaaggcagtcagaacctgctcttc
tcctaccaacctcctcaaccctccagtcggctttctgtatctcagtctggggacctgacc
atcactgatgctgagcgctcagacatgggatactacagctgccaggccatcaacacagct
ggcagtgtcctcaccaaggctctgctggagatcactgatgttatctcggaccgcccgcca
ccagttatccgtcagggcccaaccaatcaaacggtagctgtggacggcacagtggtcctc
aactgtatggcaaccggaaaccccacccccaccatcctgtggaggaaggatggtgtcttg
gtatccacacatgactccagggtcaaacagctggacacgagtgcgttgcagatacgctat
gcaaaacttggtgacactggtacctacacctgcatcgcctccacccccagtggagaggcc
tcatggaaagcctacttagaggtccacgagtttggagttccagtccagccaaacaggcct
actgacccaaacctgatccccagtgccccttccaaacccgaagtcactgatgttacccgg
acctccatctccctttcctggagacctaaccttaatgctggagccacacccacctcctat
ataatagaggccttcagtcatgcatcaggaagcagctggcagaccttggcagagcatgtg
aaaactgaatcatttgtactgaagggcttgaagccgagtgcagtctacctcttcctagta
cgggcagccaatgcctatgggctgagtgatcccagtccaatcactgaatctgtgaaaaca
caagatatccctccgaccagtcagggtgtcgaccatcgacagatccaaacggagttggga
gaagtgctcatccacctgcacaaccccaccattctctcctcttcttctgtcagagtgcag
tggacagtggagcaacagtcacagtacatccagggctacaaggtgatgtacaggccttca
ccagaggggctgcagaggagcgaatgggctgtgttcgaggtgcggacccctggagaggac
agcgccgttgtgccgcagcttcggaaaggagtcgcgtatgaattcaaaatccgccccttc
ttcaatgaattccagggaacagacagtgatgtaaaaattggcaagacgctggaggaagcc
cccagtgcccctcctcgcgaggttacagtggcggagagcggggacaatgggaccgccatc
gtggtctcctggcaaccccctccagaagaggagcagaatggggtggtccaggagtacaag
atttggtgcttggggaatgagagcaggttccatatcaaccgtacagttgacggctcggcc
ttatccgtgctgattcccagtctggccccagggatccgctacagtgtggaggtagcagcc
agcaccggggcgggtccaggggtcaagagcgatatcaccttcttccagctcgatgcgtct
gggcgaatgacagagaccgtggaccaggagaaccccctgtcccagcagatctcagatgtg
gtcaagcagccggcctttatagccggcataggagccgcttgctggatcatcctcatggtc
ttcagcatctggttgtacagacacaggaagaagaggaatggcctctccagcagctatgca
ggcatccgcaaggtgccatcctttactttcacaccaacagtggcataccagagaggagga
gaaggtgttagcagcgctggaaggcctggattgctaaacattggggaatctgccactcag
ccctggctggcagacacatggcccaactcctgctccaaccacaatgactgcagcatgaac
tgctgcactgccggcaacggcaacagcgacagcaacttggcaacgtacagccgcccagcc
gactgcatcgccaattataacagccagatggaaaacaagcagaccaacctcatggtgcca
gagtcaggagtctatggagacattgacttgtccaacaagatcaatgagatgaagaccttt
aacagtccaaacctgaaagatggccgctttgtgggtccagggggccagccgacaccgtac
gccaccacccagctcatccagtcctccatcatgggaaacaacgttaactcagacagagga
accggagggagtggaggaggactcatgggtggaggagagatgaatgaaaaacacagctgg
aagcccacctcagttcagcagcagaaacaggaattggcctcccagctacagtacaacatc
atggagcaaaacaagctgaacaaggaccgctacagagggggcgacggcccaatgccagcc
accatcccctacaaccagacccatgacagccacactgggggctcctacaacagctccgac
cgaggcagcagtagcacctccggaagtcagggtcagaagaaaggcgtgcgcacccccaaa
ctacccaaacagagcacaatgaattgggctgaccttttgccccctccccctgcaaaccca
cctccaagccggagcgcagaggagtactccctgtcgatggaagaaagctgtgaaccagac
atgcagtgccccatgcccccctctcacatgtacctgcagcctgatgagctggaggaggaa
gaggagatggagaggggccccactcctcctatccgaggggcggcctcttcccctgcagct
gtatcttacagtcaccagtctacagccacactcaccccctcaccccaggaggagatgcag
ccaatgctccaggacgcacttgacagccatgaacgcagacgccacactgtgagcccccca
gcccctccaaggccccactctccttcacacacatatgggtacatcaccagcccattggcc
ttggacactgatggtatggaggaggaagaggaggatgatatattggaggaagaggaggag
gaaggtgatgagacagatgcagaggtggccaagatgcactaccaccacacccacccccac
acacacccccaccatccccagatgcaccctcgaaggttgctgctgcgagggcttgaacag
acgcctgcgtccagcatgggcgacctggaaagctcggtgaccggctccatgatcaacgga
tggggttccgcttctgaagaggataatgtctcttcagggaggtccagtgccgtcagctca
tcagacggatcattcttcactgatgctgactttgctcaagcggtggctgcagctgcagag
tattcaggcatcagggtggccacatatcccaacacactgggccacgaagttgcaggagct
tccgcacgaaaataccaaataaacccgccgagccaccgtcctggaagcccggtgtccaca
gacagtaacatgagtatggcagctgtacacaggaggcctccgaagaagcagaaacagcat
cctgcaggtcatcctgcaggtcatcctgcaggtcatcctgggaaccagcgacgtgaagcc
tataatgaagatctcccacctccgcccatcccacctccagccgggcttaagtcgcctaca
cacccctccaaggcagtgctggatggccggggagtgatttcccccaaagcaggagaggga
cgagacaagagaggtggaacggggggttatcggcccagagagggctcggaccctagaaac
agctcatctgaacgcaaagaccctcaagagagacaaaagactgctcatggagggaaaggg
aataaacatgagggtagcagcgccaacaaggcacggcaacacccaggttcagaggacatt
ctgccctatagccgaccacagttccccacagtcaacagcccccgggacccaagctcttcc
agctccatgtcctcgaggggctcagggggtcggcgaagaggagaaggaggccgcaggaac
cctgcagacatgggccttaacaccacaggggccttccaaccaggagatgaagagcttgag
atggtagaaagctga

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