Cyclopterus lumpus (lumpfish): 117741904
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Entry
117741904 CDS
T09199
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117741904
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117741904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF_3
TB
EGF
hEGF
EGF_2
EGF_Teneurin
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
117741904
NCBI-ProteinID:
XP_034405057
LinkDB
All DBs
Position
13:20356496..20445360
Genome browser
AA seq
2314 aa
AA seq
DB search
MRLLLWCVCAAALHAAAQHPADREEGGSQPGRRAALSGPRACGGRCCVGWTLSPRTGRCT
KPRCLPRCLNLSSCRQSNRCVCRRGFHGDRCEFSSLTGVRLLKSPIRPEPGAAEPNPPEA
LKKEKAAETPNTQEENQAARPQTRDTEEEEGARTAEFKTGTPKEKEEPSHSSKSPSEDPL
KSSRDLNLETRSRTENTVTSSRDLNLETRSRTENTVTSSRDLNLESRSRTQVPLLSSRDL
NLETRSITQGPLLSSRDLNLETRSRTEGPLNLDSRPDPEPDPGPRGREGVQGEKKKEART
QSLSLREAQLLRKTLSRGGRGDKMAALLMKHIEKERKKLLSVTSSPHSSSSSSSSSVKTS
VKTFYTQKGQYRVQVAADGQTVSGGGAVERVKVMFTPTVCKVRCSQDRCVNYCERGNVTT
LYSSDGGGGGGGGGGGRRDSSHGLGFRVFLCPLLCKNGGVCLQKDRCLCPPNFSGKFCQI
PVAPVAPPASSSSGSTNEIVKPAMRSALADNQELTQSEFLLPLGHNQETGMSGAPGPSMV
TVRVQHPPEASVNIHQVLKVSGSSPALRTLSSSSGSAGAPAPAVGGVQAQTVRGGGTFPQ
PTSFKYCFSQVTDGQCSSPLPGLRSLEICCGGVGKAWGTTDCVLCPDTTGKRCPVGFKGA
NGTQCVDVNECLQPGLCENGLCVNTRGSYSCVCRAGFILDASNGICISQTVISQEKGQCH
RVLGWGLGPSSCSLPILRNITKQICCCSRVGKAWGPECQRCPYFGSVAFKEICPAGPGYH
YSASALQFNQRVNEQLGSRGAQLVTHGHQESHGNHASGSRSQQKPSSSGATAGGATAGGA
TTGSASTGSSSTRTRPGPPQPRPADSPSSWPVQPGGTSATATRDKTPAPGRPVTQQNWPD
QPVARGDSPLAPARELPPLSRPAASPTPLNPRVQTVRGVCESRPGVCGHGRCVEQPDIKH
TCVCDEGYQTNGQRTSCQDVNECVQSAGVCAGGECVNTMGSFRCVCPPGYRSSSQQTRCQ
DVDECLQAPCSGGRCDNTPGSYRCVCRHGYRLSGNTCTDVDECEDSLQCPGQECINSLGS
YRCVSCQSGFGLLNGLCSDVDECRQSPCANGRCDNTAGSYHCVCRHGYRLHNNTCTDVDE
CAEPSQCPGQMCVNTVGSYRCMSCQPGYTLTNRQCADVNECEDSESCAGRQCVNTEGSYS
CEGCEEGYLSVAGVCADVDECASVGACEAERVCVNTIGSFSCDCPPGYRTSGLGRQCRDV
DECVQGSQCPGQQCVNTVGSYRCVSCQPGYSSTDGSCQDVDECASVGACEAERVCVNTIG
SFSCDCPPGYRTSGLGRQCRDVDECVQGSQCPGQQCVNTVGSYRCVSCQPGYSSTDGSCQ
DVDECASVGACEAERVCVNTIGSFSCDCPPGYRTSGLGRQCRDVDECVQGSQCPGQQCVN
TVGSYRCVSCQPGYSSTDGSCQDVDECASVGACEAERVCVNTIGSFSCDCPPGYRTSGLG
RQCRDVDECVQGSQCPGQQCVNTVGSYRCVSCQPGYSSTDGSCQDVDECASVGACEAERV
CVNTIGSFSCDCPPGYRTSGLGRQCRDVDECVQGSQCPGQQCVNTVGSYRCVSCQPGYSS
TDGSCQDVDECASVGACEAERVCVNTIGSFSCDCPPGYRTSGLGRQCRDINECLETDFCF
PRGECVNSPGSYTCVCSQGFTLSDNRTACIDVDECTNQTLCGGHAYCQNLRGTYLCVCDQ
GFSSAPDGRSCEDEDECVSLPGVCGSARCENVEGSFMCECDRRGHEFDPGSRRCVNTEPR
AETDPSSSSSSSSSSSSSSSPPVLPPLPAPRPGEQRECYYNLAEPGTCSLLASNTSQQEC
CCTLGEGWGLGCQYQGCPPTGSAHFLSLCPSGRGYLTTGAGAFSYTDVDECKRFHPEVCR
SGVCVNNIPGYHCYCPSGYVYNSTLLECVDHDECEEESCVGGVCVNTVGSYYCSCPPPLV
LDDTQRNCVNSSHLTVDENLSLCWQHVTADLVCQSPLLGAQVTFMDCCCLYGEGWGMECA
LCPPTDSDDYAALCSSFLPPLFPESFTDPGPEPGVRPGPGRGGATPPYFPPYSLDSFPPA
VAPDYDDYSPAGGSRQFGAYEPEFSPGFYPEGGASLSYLLPADPRAERAFGVRPPPPSRP
DGPPLSLAPLPGGPYQVEQQQEEEEGWRPGPPFPPFTERSRGGGGGRGGAPRRVYERRYE
SYAGLNAAEDCGILHGCENGRCIRVAEGYTCDCYQGYKLDMTSMTCTDVNECEDGVSVDF
PCVNARCVNTDGSFSCVCRRGYDMSHRPNHCVAA
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atgcggctccttctctggtgcgtgtgcgccgcagcgctccacgccgccgctcagcaccct
gcggaccgggaggagggcggctcgcagcccggccggagggcggctctgagcggccctcgt
gcctgtggggggcgctgttgtgtcggctggacgttgtcgcccagaaccggacgatgcacc
aaacccaggtgtcttcctcgttgccttaacctgtcgtcgtgccgacagtcaaaccgctgt
gtgtgtcgacgaggtttccatggtgaccgctgtgagttttcctcgctgaccggcgtccgt
ctcctcaaatctcccatcagacctgaaccaggagctgcagaaccgaatccacctgaggcc
ctcaagaaagagaaggctgctgagaccccgaacacacaggaggagaaccaagccgcccgt
ccacagacaagagacacagaggaggaggagggagccagaactgcagagttcaaaacagga
actccaaaggagaaagaggaaccctcacactcctctaaatccccctctgaggacccattg
aagtcctctcgagacctgaacctggagaccaggtccagaacagagaacacagtgacgtcc
tctagagacctgaacctggagaccaggtccagaacagagaacacagtgacgtcctctaga
gacctgaacctggagtcaaggtccagaacacaggtcccattgttatcctctagagacctg
aacctggagaccagatccataacacaggggccattgttatcctctagagacctgaacctg
gagaccaggtccagaacagagggcccattgaatctggactccagacctgatccagagcct
gatcctggaccgagaggacgggaaggtgtgcaaggagagaagaagaaggaggcgaggacg
cagtcgttgagtctgagggaggcccagctgctgaggaagactctgtcacggggaggaaga
ggagacaagatggccgccctgctgatgaagcacatcgagaaggagaggaagaagcttctg
agtgtgacctcatctcctcactcttcatcctcgtcatcctcatcatcagtaaaaaccagc
gtgaagactttctacactcagaagggccagtacagagtccaggtcgctgctgatggacag
acggtctcgggaggcggagccgtggagagggtcaaggtgatgttcacgcccactgtctgc
aaggtgcgctgcagccaggaccgatgtgtcaactactgcgagcgaggcaacgtgaccacg
ctgtacagcagcgacggaggaggaggaggaggaggaggaggaggaggaaggagggacagt
tcccacggactgggcttcagagtcttcctctgtcctctgctgtgtaagaacggaggcgtc
tgcctgcagaaggaccgctgtctctgcccgcccaacttcagtgggaagttctgccagatc
cccgttgcccccgtggccccccccgcatcgtcctcctcaggctccaccaatgagatcgtc
aagccggcgatgcgctccgccttggcggacaatcaggagctaacccagtctgagttcctc
ctgccgctgggtcataaccaggagacagggatgtctggagctcccggcccgtccatggtg
acggtcagggttcagcacccccccgaggccagcgtgaacatccaccaggtgctcaaggtc
tccgggtccagtcccgccctccggaccctctcctcctcctcggggtcggcgggcgctccg
gctccggcagtcgggggggtccaggcccagacggtgagggggggcggcacgttcccccag
ccgaccagcttcaagtactgcttcagccaggtgacagacgggcagtgcagctctcccctc
cctggtctccgcagcttggagatctgctgtggaggagttggtaaagcttgggggacgact
gactgtgtcctctgtcctgatactacaggtaaaagatgccctgttggctttaagggagcc
aacggaacacagtgtgttgatgtgaatgagtgcctccagccggggctgtgtgagaacggg
ctctgtgtgaacaccagagggagctatagctgtgtgtgtagggcggggttcatcctcgac
gcctccaatggaatctgcatctcccagactgtgatatcccaggagaagggccagtgtcac
cgggtcctgggttggggtctgggtccgtcctcctgctcgctgcccatcctcaggaacatc
accaaacagatctgctgctgcagccgagtgggcaaagcctgggggcccgagtgccagagg
tgcccctactttggttcagtggcctttaaggagatctgtccagccggtcctggttaccac
tactcggcttcggctctgcagttcaaccagagagtcaacgagcagctggggagccgagga
gctcagctggtcacccatggccaccaggagagccatggtaaccacgcctctgggtccagg
tctcagcagaaaccctcttcctctggagccacagctggtggagccacagctggtggagcc
acgacgggttctgcttcaactggttccagcagcacccgaaccagacccggtccccctcag
ccccgcccggcagactcgccctcctcctggcccgtgcagcccggcggcaccagcgccaca
gccacccgggacaaaaccccagctccaggcagacccgtgacccagcagaactggcccgac
cagccagtagcgaggggggactctccgctggctccggcccgagagctgcctcctctgagc
agaccggctgccagcccgacccccctgaacccccgagtccagacagtgcgcggtgtgtgt
gagagcagacccggtgtgtgtggacacggtcgctgtgtggagcagccagatataaaacac
acctgtgtgtgtgatgaagggtatcaaaccaacggccagcgcacctcctgccaagatgtg
aatgagtgtgtgcagtctgcaggtgtgtgtgcaggaggagagtgtgtgaacacgatggga
agcttcaggtgtgtttgtccgcccggctacagaagcagcagccagcagacccgttgtcaa
gacgtggatgagtgcctccaggctccgtgctccggcggtcgctgtgacaacacgccgggc
agctacaggtgtgtctgtcgccatggttacaggctcagtggaaacacctgcacagacgta
gatgagtgtgaggactctctccagtgtcccggtcaggagtgcatcaacagtttgggttcg
taccgctgcgtctcctgtcagtctgggttcggactgctcaacgggctctgctcagacgtg
gacgagtgtcgccagtcgccgtgcgccaacggtcgctgtgacaacacagccgggagctac
cactgtgtctgtcgccatggttacaggctgcacaacaacacctgcacagatgtggatgag
tgtgcagagccgtctcagtgtcctggtcagatgtgtgtgaacactgtggggtcgtaccgc
tgcatgtcatgtcagccaggatacacactcaccaacagacagtgtgcagatgtgaacgag
tgtgaggactcagagtcttgtgctggtcgtcagtgtgtgaacactgaaggctcttacagc
tgtgagggctgtgaggaggggtacctcagtgtggccggagtgtgtgcagatgttgacgag
tgtgccagcgtcggggcgtgcgaggcagagcgtgtgtgtgtgaacaccatcggctcgttc
tcgtgtgactgtccgcccgggtatcgaacctccggcctggggagacagtgcagagatgtg
gatgagtgtgtgcagggctctcagtgtcccggtcagcagtgtgtgaacacagtgggatcg
taccgctgtgtgtcctgtcagcctggatacagcagcacagatggctcctgtcaggatgtt
gacgagtgtgccagcgtcggggcgtgcgaggcagagcgtgtgtgtgtgaacaccatcggc
tcgttctcgtgtgactgtccgcccgggtatcgaacctccggcctggggagacagtgcaga
gatgtggatgagtgtgtgcagggctctcagtgtcccggtcagcagtgtgtgaacacagtg
ggatcgtaccgctgtgtgtcctgtcagcctggatacagcagcacagatggctcctgtcag
gatgttgacgagtgtgccagcgtcggggcgtgcgaggcagagcgtgtgtgtgtgaacacc
atcggctcgttctcgtgtgactgtccgcccgggtatcgaacctccggcctggggagacag
tgcagagatgtggatgagtgtgtgcagggctctcagtgtcccggtcagcagtgtgtgaac
acagtgggatcgtaccgctgtgtgtcctgtcagcctggatacagcagcacagatggctcc
tgtcaggatgttgacgagtgtgccagcgtcggggcgtgcgaggcagagcgtgtgtgtgtg
aacaccatcggctcgttctcgtgtgactgtccgcccgggtatcgaacctccggcctgggg
agacagtgcagagatgtggatgagtgtgtgcagggctctcagtgtcccggtcagcagtgt
gtgaacacagtgggatcgtaccgctgtgtgtcctgtcagcctggatacagcagcacagat
ggctcctgtcaggatgttgacgagtgtgccagcgtcggggcgtgcgaggcagagcgtgtg
tgtgtgaacaccatcggctcgttctcgtgtgactgtccgcccgggtatcgaacctccggc
ctggggagacagtgcagagatgtggatgagtgtgtgcagggctctcagtgtcccggtcag
cagtgtgtgaacacagtgggatcgtaccgctgtgtgtcctgtcagcctggatacagcagc
acagatggctcctgtcaggatgttgacgagtgtgccagcgtcggggcgtgcgaggcagag
cgtgtgtgtgtgaacaccatcggctcgttctcgtgtgactgtccgcccgggtatcgaacc
tccggcctggggagacagtgcagagacattaacgagtgtttggagacagacttctgtttc
cccagaggagagtgtgtgaactcaccaggatcctacacgtgtgtgtgttctcagggattc
actctgagcgacaacagaaccgcctgcattgacgttgacgagtgcaccaatcagacgctg
tgtggaggccacgcctactgccagaacctcagagggacgtacctgtgtgtgtgtgaccag
ggcttcagctccgcccccgatgggcggtcctgtgaggacgaggacgagtgcgtgtcgctg
cccggcgtgtgcggttccgctcgctgtgagaacgtggagggttccttcatgtgtgagtgt
gacagacggggtcacgagttcgatcccggcagcagacggtgcgtcaacacggaaccacga
gcggagacggacccctcctcctcttcctcttcctcctcctcctcctcctcctcctcctcc
cccccggtgctgccccccctccccgcgccgcgtccaggtgagcagagggagtgctactac
aacctggcggagccggggacctgcagcctgctggcctccaacaccagccagcaggagtgc
tgctgcaccctgggggaggggtgggggctgggctgccagtaccagggctgcccccccacg
ggctcagcccacttcctgtctctgtgtcccagtgggagaggatacctgaccactggagct
ggagccttcagctacacagatgtggacgagtgtaagcgcttccatccagaggtgtgtagg
agcggagtgtgtgtcaacaacatccccgggtaccactgctactgccccagtggatacgtg
tacaacagcacgctgctggagtgtgttgaccatgatgagtgtgaggaggagagttgtgtg
ggaggagtctgtgtgaacacggtgggttcatattactgcagctgtcctcctcctctggtg
ctcgacgacacgcaacggaactgtgtcaactcctcccacctcaccgtggacgagaacctg
tctctctgctggcagcatgtcacagcagacctggtctgtcagagtcctcttctgggggct
caggtcaccttcatggactgctgctgtctgtacggggagggctggggcatggagtgtgcc
ctgtgcccccccacagactctgacgactacgcggctctctgcagttcttttcttcctcct
ctgtttccggagagcttcactgatcctggaccagaacccggagtgagaccaggaccagga
cgaggaggcgccactcctccgtacttccctccctacagccttgactccttccctcctgcg
gtggctcctgactatgacgactactccccagcagggggcagcaggcagtttggagcctat
gagccggagttcagccctggtttctaccctgaaggaggcgcgtccctgtcttacctcctc
cctgctgacccgcgggctgagagggcgttcggggttcgtcctcctcctccgtcccgaccc
gatggtcctcctctcagcctggccccgctgcccggggggccctaccaggtggagcagcag
caggaggaggaggaggggtggaggccggggcccccctttccccccttcactgagaggagc
agaggaggaggaggaggaagaggaggagcaccaaggagggtctatgagaggcgttatgag
tcctatgccggcctgaatgcagcagaggattgtgggatacttcacggctgtgagaacggc
aggtgtattcgtgttgccgagggttacacctgtgattgttaccaaggatacaagctggac
atgacctccatgacctgtacagatgtaaacgagtgtgaggacggcgtctccgtggacttc
ccgtgtgtgaacgctcgctgtgtgaacactgacggctcgttcagctgcgtctgcaggaga
ggatacgacatgtcccacagacccaaccactgtgtggctgcgtag
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