Cyclopterus lumpus (lumpfish): 117741991
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Entry
117741991 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: CD166 antigen homolog A-like
KO
K06547
activated leukocyte cell adhesion molecule
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117741991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117741991
04090 CD molecules [BR:
clum04090
]
117741991
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
ALCAM
117741991
CD molecules [BR:
clum04090
]
Proteins
117741991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
ig
I-set
V-set
C1-set
Syndecan
TMEM154
DUF6377
Shisa
DUF4064
BCLP
Motif
Other DBs
NCBI-GeneID:
117741991
NCBI-ProteinID:
XP_034405196
LinkDB
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Position
13:complement(6712010..6743267)
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AA seq
569 aa
AA seq
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MQLLSASCVCALLLATLLRQVSSLETVIGLYGETFEIPCNNGTINAQDILMTKWKYDKGE
GLTGDLLVKQKNQNVSISATDEYKGRVSMAANSSLLLSAAKLTDQRTFTCMVVTGDITEY
PVNVVIYKSPAGLEISDKAEDLEIGKLTKLGTCVAKDSNPAVNITWQKNNRPLVADGKGV
DSIHASVLVDPVTGLSTTSSMLEYSAKKEDTGAEFTCSTRHTVGTELVSSPATFTITYST
ETMVLQVSAPDPLVEGDNVSLKCMADGNPAPTAFNFHLKGELVKVENTDTYTLTNVSRNS
TGEYKCSLADDPTMKAITDITVSYLDINLSPSGSIAKKVGEAVDLTLQIDASGDVKVSWT
KDNVKLNKEPKFTKRTYADSGRYECEVTXGLLSQKDFLELAVKGAPVIRRLTKQPGEGGR
HKVLICEVEGSPKPAVSWSINGTSLAESPFVDGKITHKITVVPTANLSVSCSVSNELGAD
STTINVSSLIEAVRMDKQDQSDDNDQTKLVVGVVVGLLVATIVIGLAYCVYMKKSKQGSW
KTGERRDGSSEEEKNXEEKVEENSQKAEV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgttgtccgccagctgcgtgtgtgccctcctcttggccacgctcctccgccaa
gtcagcagtttggagactgttatcggcctgtatggggaaacattcgagatcccctgcaac
aatggaaccataaatgcccaggacatcctcatgactaaatggaaatatgacaaaggagag
ggacttacgggagacctgctggtcaagcagaaaaaccagaatgtttcaatcagcgccact
gatgaatacaagggacgtgtgagcatggctgcaaactccagcctgctgctctctgcagcc
aagctgactgaccagcgcactttcacctgcatggtggtgactggtgacatcacagaatat
cccgttaatgtggtgatctacaagtcgccggcaggcctggagatttctgacaaagcggag
gacctagagattggcaaacttactaagcttgggacatgtgttgcaaaagactccaatcca
gctgtaaatatcacatggcaaaagaacaacagacctctggtagctgatgggaaaggtgtg
gattccatccacgcctcggtgttggtggaccctgttactggcctttcaactacttcttcc
atgctggagtactcagccaagaaggaagacacgggcgctgagtttacctgcagcactcgg
cacactgtgggcacagagctggtgtcctctccagcgaccttcacaatcacctactccaca
gagaccatggtccttcaggtcagtgctccggaccctcttgttgaaggagacaacgtgagt
ctgaagtgtatggcagatggtaacccagctcctaccgcctttaacttccaccttaaggga
gagttggtgaaggtggaaaacacagatacttacaccctcacaaatgtgtcacgtaactcc
actggtgaatacaaatgctctcttgctgacgacccaacaatgaaagcaatcacagacatc
acagtcagctacctagacatcaatttaagcccctctggaagcatcgccaagaaggtcggt
gaggccgtggatctaactctccagattgatgcctctggagacgtcaaggtctcctggaca
aaggacaatgttaaactgaataaagagcccaagtttaccaagcggacttacgctgactct
ggccgctatgagtgtgaagtgacgntggggctcctcagccaaaaagattttcttgagctg
gctgtcaaaggtgctccagttatcaggcggctgaccaaacagcctggtgaaggcggcaga
cataaagtcctgatctgtgaggttgaaggttctccaaagccagctgtttcctggagcatc
aacggcacctcgcttgctgagagtccattcgtcgacggaaagataacacacaagatcaca
gttgtgcctactgcaaacctctctgtctcttgttcggtgtccaatgagttaggcgcggac
agtacgactataaatgtgtcatccctaattgaggcggtgagaatggataaacaagaccaa
tcggatgataacgaccaaaccaagctggtagttggagttgtggtcggtctcctcgtcgcc
actatagttattggcctggcatactgcgtctacatgaagaaatccaagcaaggaagctgg
aagactggtgaaaggagggacggttcctctgaggaggagaaaaacnntgaggagaaagtg
gaggagaacagccaaaaagctgaggtgtaa
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