Cyclopterus lumpus (lumpfish): 117742005
Help
Entry
117742005 CDS
T09199
Symbol
treh
Name
(RefSeq) trehalase isoform X1
KO
K01194
alpha,alpha-trehalase [EC:
3.2.1.28
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00500
Starch and sucrose metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117742005 (treh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117742005 (treh)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.28 alpha,alpha-trehalase
117742005 (treh)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Enzymes
117742005 (treh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trehalase
MGH1-like_GH
GDE_C
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117742005
NCBI-ProteinID:
XP_034405216
LinkDB
All DBs
Position
13:complement(11922347..11933534)
Genome browser
AA seq
617 aa
AA seq
DB search
MLTLVLFSLSSVALSTCVNGAFPPPCDSEIYCAGPILHQVQQAKLFDDDKYFVDMKLRES
PDVVLSAFRNLSSEWPNATVPPAELQEFLSAYFEEPGTEFESWTPPDWHDQPKFLGGIAN
QELRNWAEKIHMLWKSLGRKISAGVGDHPELYSLIYTPHPVVVPGGRFRELYYWDSYWVI
NGLLLSEMTDTAHGMIQNLLYLVNRYGFVPNGGRIYYERRSQPPFLTLMVESYYQATKNK
EFLRAALPALEQEYRFWMQNRSVTVKVNGATHVLNRYHVQVGLPRPESYTDDLELAEGLT
DVCKERLWMDLKAGAESGWDFTSRWYTDGHINGSLGDTGTSQVLPTDLNALLCLNEKTLA
SFHRILGDGDSAALYDQHAARRLEAMESVLWDAERGAWFDFNLMTHSKHFEFYPSNLAPV
WAQCYSRPEMGEKAVQYLKKSGALQFPNGVPTSLSQSGQQWDYPNAWPPLQHMLIDGLSK
LPSEDAQQLAFGLAQRWIKTNWLAYMKYEAMFEKYDVNGDGKPGGGGEYEVQLGFGWTNG
VALQLLDQYGATLTAGSPRVFSGLLLPLVISAALMLQVLLVLQEPALTCRDNPHPTHQHP
CSLETRDGGCAGRLSVL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgttggtgctgtttagcttgtcgtcggtggcgctttccacctgtgtaaatggt
gctttcccaccaccgtgtgacagtgaaatctactgcgccgggcccatcctgcatcaggta
cagcaagccaagctcttcgatgatgacaaatactttgttgacatgaagctgagggaaagt
cctgatgttgttttgtctgcttttcgaaacctttcaagtgaatggccgaatgccaccgtc
ccgcctgccgagctgcaggagttcctcagtgcgtactttgaggagccagggacagagttt
gagtcatggacgccgccagactggcatgaccagccaaagttcctgggaggaatagcaaac
caagaactacgtaactgggctgaaaagatacacatgctatggaagtcgctcggcagaaag
atctctgctggcgttggagatcacccagagctctactcgctgatatacaccccgcatccc
gtcgttgtgccgggggggcgcttcagggagctctactactgggactcctactgggtcatc
aatgggctcctgctgtcggagatgacagacacggcccacgggatgattcaaaacttgctc
taccttgtcaacagatatggcttcgttccaaatggtgggcggatttattatgaaaggcgc
agtcagcctccattcctcactctaatggtagagagctactatcaagcaacgaagaataaa
gagttcctcagagcagctttaccagctctggagcaggagtaccgattttggatgcagaac
cgctctgtgactgtgaaagtaaatggagcaacgcatgtactgaaccggtatcatgtgcag
gtgggcttgcccaggcctgagtcctacacagatgatctggaattagctgaaggactcaca
gatgtctgtaaggagcggctgtggatggatctgaaagcgggtgcagagtctggctgggac
ttcacgtcccgctggtacacggacggccacatcaacggcagcctcggggacaccggcact
agtcaggtcctgcccactgacctcaacgctcttctgtgcctcaatgagaagactcttgcc
tcgtttcacagaatactgggtgatggtgactcagctgcactgtatgaccagcatgccgcc
cgcagactggaggcgatggagtctgtgctgtgggatgctgagaggggagcctggtttgac
ttcaacctgatgacgcactccaagcactttgagttttacccctccaacctggcacctgtt
tgggcacagtgctattctcggcccgagatgggagagaaggcagtccagtatctgaagaag
agtggtgctctccagttccccaatggagttccaacgtcgctgagccagtctgggcagcag
tgggactaccccaacgcgtggcctcctctgcaacacatgctcatcgacggtttatccaaa
ctgccctcagaggatgctcaacaactagcatttggtttggcccagcgttggatcaagacc
aactggttggcgtatatgaagtatgaagccatgtttgaaaagtatgacgtgaacggcgat
ggcaaacctggtggtggaggagaatatgaagttcagctgggttttggctggaccaatggt
gtggccctgcagctcctggaccagtatggggcgactctcaccgcgggaagcccacgagtg
ttttctggcctcctgctgcctctcgtcatctcagccgctctcatgctccaagttctcctg
gtgctgcaggaacctgctctgacctgcagggataatcctcaccccacgcaccagcatccc
tgcagtctggagacccgggatgggggatgtgcaggaaggctgtccgtcctctga
DBGET
integrated database retrieval system
