Cyclopterus lumpus (lumpfish): 117742262
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Entry
117742262 CDS
T09199
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00562
Inositol phosphate metabolism
clum01100
Metabolic pathways
clum04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
117742262 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
117742262 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117742262 (synj1)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
117742262 (synj1)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
117742262 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Motif
Other DBs
NCBI-GeneID:
117742262
NCBI-ProteinID:
XP_034405257
Ensembl:
ENSCLMG00005013672
UniProt:
A0A8C2ZVR0
LinkDB
All DBs
Position
14:complement(11831955..11856304)
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AA seq
1681 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRSREECLMFESGAVAVLSAAEKEAIKNSYAKILDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDSGDEDRIAEVR
KVLNSGHFYFAWSATGVSMDLSLNAHRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DRVSSFIQIRGSIPLFWEQPGIQKKSIKGVLLHLNENRHRNGMDDNPHLVGSHRVKLSRG
FEANAPAFERHFTALRRLYGKQVIINLLGSKEGEHMLSKAFQSHLKASEHISAVKMVNFD
YHQNVKGGKADKLHSVLKPYLSKFIEECGFFYYSAETGIVRTQGGTIRTNCLDCLDRTNS
VQAFFALEMLPKQLEEMGLTEKPQLVARFQEVFRTMWSANGDSVSKIYAGTGALDGKAKA
GKLKDGARSVTRTIQNNFFDSSKQEAIDILRLGSTLNSDLADKARALLTTSSLYASPRVL
LGMCQNHHKYTRPKQIRVGVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPKKAGHPEFQDS
KANPIDIFAIGFEEMVELNAGNIVSASTTNQKLWAAELQKNLSRDHKYVLLASEQLVGVC
LFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGGVAIRLLFHTTSICFVCSHFAAGQSQV
KERNDDYSEITRRLTFPMGRLLYSHDYVFWCGDFNYRIGLPNEEVKELIKQQNWDALTAG
DQLVDQKNAGLVFRGFIEGKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRILWKRRKWNF
NKAAEEMNVVGAASTSGDNDDDPDNPWSPGTLKYYGRAELKTSDHRPVVSIIDVDILEVD
PEARHQVYKEVIAQQGPPDGTILVSLCSSGPDDYFDDALIDELLDKFAHFGEVILIRFVE
EKMWVTFLEGYSALAALSLSASTVLGKMMDIRLKSPGWIKSLEEEMSMDRICGSIPTSAS
STLLAEDTDMGDDDYDMEGDVDEEVEEILPQHLQPGAGSGPGSSPLPSPHSSPCNSPTHG
EPVAPGRSSRGGQPSRPSQGPPVDFQPGAPTSWEPKRPPPPRPHAPPARPAPPQRPPPPS
GPKSPALPRPDAAVARGQVAVGAAGPGGAPRPNIPPRAGVISIPPQSRPLPLSHPGAPRP
ILEVHPGAPRPIPDTHPGAPRPVPCGQVKPTDLPLGPPPSGPPPTEPPAARAQVPSPMQA
PMQPQPAAPTAQSQLPPPMQPTLQAPLQPSQAPKTGPPPAAAPAGSPQGLASPKPPPRSR
SSHVLPPEAAKSDTAPAAQTNGLNGIQREAQWMPGPFETPASDFLSSSSSSWHSTQSLTR
GSSLRAPPSVPAFTSASSSTLPSSFSLQPSTRSDLQALDSSSSSTLSTPSPFASSLLPPP
PIQSRSRSQETLCASPGPLLTDPLPARPSSTNPFTGPLPQQHQHRSLTPDFSAQRPTPTP
NIQRTMSAFTQPLILTPAPTAAPTAGPTFQLQRTMSLFGPSSTFPSTHVPLLPLAPSPVP
SLPLAPASSIPPVLAPRRQPPPPGGKPTQRWVTFDDDLDFKPPTKTPQAPVFPSSSLVSQ
TQSSNSVFDSEPDWLSSVPSVFPTLPPAIPSRTVNSNTKPPEGPSDDSFFPRESTERHDH
F
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaagggatatcgcatttaccacaagctggacccacccccctacagtgtc
atagtggaaactaggagccgggaagaatgcctcatgtttgaatctggggcggttgccgtt
ctgtcggcggccgagaaggaggccattaagaactcgtatgccaagattcttgatgcctac
ggtatcctgggcgtcctccgcctaaacctgggtgactccatgctccacagtctggtagtt
gtgacaggatgcagctctgtggggaaggtgcaggactctgaagttttcagggtcacacag
acagactttatatcgctgaagaatgattcaggagatgaggaccgcatcgctgaagtgcga
aaggtcttgaactcaggacacttctactttgcctggtctgccactggtgtcagcatggac
ttaagtctcaatgcacatcgcaggatcctagaggacacgacagataaccgcttcttttgg
aaccaatctctgcacctgcacctgaaacactacggagtaaactgtgacgactggctgttg
aggctgatgtgtggcggtgtggagatcaggaccatctatgcaggccacaaacaggccaag
gcatgcatcttctcccgactcagctcggagcgggctggcacacgattcaacgtccgagga
acaaatgacgacggacaggtggccaacttcgtggagactgaacaggttattttcctggat
gacagagtctcgtccttcatacagatccgtgggtccattcctcttttctgggagcagcca
ggaatccagaaaaagtccattaagggtgttttgttgcacctgaatgagaatcggcaccgt
aatgggatggatgacaacccccacctggtcggttctcatcgtgtcaagctctcaagggga
tttgaggcaaatgcaccagcattcgaaagacactttactgcactgcggaggttgtatggc
aaacaggtgatcatcaacctgctcgggagtaaggaaggggagcacatgctcagcaaagct
tttcagagtcacctgaaggcatcggagcatatatcagcagtgaagatggtgaactttgac
taccatcaaaatgtgaaggggggcaaagcagacaaactccacagtgtcctcaaaccctac
ctcagcaagttcatcgaggagtgtgggttcttctactactctgcagagacgggcatcgtg
aggactcaaggtgggaccattaggaccaactgcctggactgtttggatcgaaccaacagt
gtccaggccttctttgcccttgagatgctgccaaagcaactggaggaaatgggtctgaca
gagaaaccccaactggttgccagattccaggaggtcttcaggaccatgtggtctgccaat
ggagactccgtcagtaagatctatgcgggcactggtgccctggatggcaaggccaaggcg
ggaaagctcaaagatggcgctcgttctgtgacgaggaccatccagaacaacttctttgac
agttctaagcaggaagccatcgacatcctgaggctgggctccacactcaacagtgatttg
gcagataaggctcgggccttgctcactacttccagtctttatgcctccccgagagtattg
ctgggaatgtgtcagaaccaccataaatacacgaggcccaagcagatccgagtgggcgtc
ggcacctggaatgtcaacgggggtaaacagtttcgcagcattgctttccgcaaccagaca
ctcaacgactggctgttggatgctccaaagaaggccgggcatcctgagttccaggatagc
aaagcaaaccccatagatatctttgccatcggcttcgaggaaatggttgaactaaatgct
ggaaatattgtcagtgcgagcactacaaaccagaaactttgggcagctgagctccaaaaa
aacttatcgagggaccacaagtatgtgctgcttgcttcggagcagctggtgggagtgtgt
ctgtttgtcttcatccgcccacagcacgcacccttcatcagggatgttgccgtagatact
gttaaaactgggatgggcggggctacaggcaataaaggaggtgtggccatccgcctgctc
ttccataccaccagcatctgcttcgtctgctcccactttgctgctggccagtcacaggtc
aaggagaggaacgacgactacagtgagatcacacgcaggctcaccttccccatgggtcgt
ctgctatactcgcatgactacgttttctggtgtggagactttaactatcgaatcggcctg
cccaatgaggaagtgaaagagctaatcaagcagcaaaactgggatgccttgacagctggg
gaccagttggtggaccagaagaatgctggtttggtgttccgaggttttatcgaggggaag
ttagattttgctcccacctataagtatgacctcttctcagaagattatgacaccagtgag
aagtgccgcacaccagcctggactgaccgcatactctggaagaggaggaagtggaacttt
aataaagcagctgaggagatgaatgtagtgggagcagcttctacatctggggacaatgac
gatgatccagataacccctggagcccaggcactctgaagtactatggcagggctgagctc
aagacctcagaccacagacccgtggtgtcgataatagatgtcgacatcttggaggtcgac
ccggaggcgcgacaccaggtctacaaagaagtcattgcccaacaggggcctccggacggc
accatcctggtgtcgctctgctcctccgggcctgacgactactttgacgatgctctcatt
gacgagctgctggacaagtttgctcattttggggaggtcatcctcatcaggtttgttgag
gagaagatgtgggtgactttcctggaaggttactctgctcttgcagctctttctctcagc
gcttccactgtccttggcaaaatgatggacatccgtctgaagagtccaggctggatcaag
agtctggaggaggagatgagtatggatagaatctgtggcagcatccccacctcagccagc
tccaccctgcttgctgaggacacggacatgggcgatgatgattatgatatggaaggggat
gtggacgaggaggtggaggagatccttccccagcaccttcagcccggagcaggctcaggc
cctggatcctcccctctcccctccccccacagtagtccctgtaactcacctacccacgga
gaacctgttgcccccggcaggtctagtcgtggaggacagccctcccgaccatcacaaggg
cctcctgttgacttccagcctggtgcccccacatcatgggagcccaaacgccctcctcct
ccccgtccccacgcccccccagccagaccagcacctcctcaacgccccccaccaccttca
ggaccaaaaagccctgctctccctcggccagatgcagctgtagctcgaggccaggtagca
gtgggagctgctggacctggaggtgctcccagacccaatatccctcctcgggcgggggta
atcagtataccccctcagtctcgcccactacctctctcccaccctggagcacccagaccc
atcctagaggtgcatcctggggcccctcggcccatcccagacacccaccctggagcccca
cgacctgtgccctgtggccaggtcaaaccgactgacctgcctctgggtccccctccctca
ggacctccccctacagagccccctgcagcgagagcccaggttccatcccccatgcaggca
cccatgcagccccaaccagctgcccctacagctcagtcccaactcccaccaccaatgcag
cccacacttcaagctccactccagccttcgcaagctcctaaaacagggccccctcctgct
gctgcccctgccggctctccacaaggtctagcctctcctaagccgccaccgcgttcccgc
tcctctcacgttctgccacctgaagccgccaagtctgacacggccccagctgcgcagacc
aatggactgaatggaatccaaagagaagcacaatggatgcccggccccttcgaaacacct
gcttctgatttcctctcctcctcgtcatcctcctggcacagcacccagtctctgaccaga
ggctcctctctgcgtgctcccccctctgttcccgcgtttacgtctgcgtcctccagcact
ctcccttcatccttctccctgcagccctccactcggtcagacctgcaggcacttgattcg
tcgtcgtcctccacgctttccaccccgtcaccgttcgcctcctccctgctcccgcctcct
ccgatccagtctcgtagccgctcgcaggagacgctgtgcgcctctcctggccccctcctg
actgacccgcttccagcccgaccaagcagcaccaatcccttcacaggcccactgccgcag
cagcatcagcaccgctcgctcacgccggacttcagcgcccagcgtcccaccccgactccg
aacattcagaggacaatgtctgcttttactcaaccactcatcctcacccctgctccaaca
gcagccccgactgctggacccaccttccagctccaaaggaccatgtccctgtttggtccg
tcatccacttttccttctacacatgttcctctgcttcccctcgccccatcgcctgtcccc
tccttgcccctggcgccagcctcctccattccgcctgtcctcgcacctcgtcgccagcca
cctcctccaggagggaaaccgacccagcgttgggttacttttgatgatgatttggatttt
aaacctcccaccaaaacgccacaggcccccgtcttcccctccagttccctagtgtcccaa
actcagtcctcaaactctgtgtttgactccgagcccgactggttatcctcggtcccttca
gtattcccaactctccctcctgccatcccaagcagaactgtaaacagtaacacaaagccc
ccagagggacccagcgacgacagcttcttccccagagagtcaacagaaagacatgatcac
ttttaa
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