Cyclopterus lumpus (lumpfish): 117742295
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Entry
117742295 CDS
T09199
Name
(RefSeq) ras and Rab interactor 3-like
KO
K17638
Ras and Rab interactor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117742295
Membrane trafficking [BR:
clum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117742295
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Gene cluster
GFIT
Motif
Pfam:
SH2
Auts2
Motif
Other DBs
NCBI-GeneID:
117742295
NCBI-ProteinID:
XP_034405328
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Position
14:complement(14115794..14120909)
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AA seq
566 aa
AA seq
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MAQVEPLYDFPEPNQSSERKLPGHQKGRGSLRSVSVLDRLLLTVPVWLQLSINPATALHI
LQREPPGNFLVRKSRTSQRNVLCVRLADDSVPSFVQQFGIREEQSSKTLSLETSAISFPD
LPRLISFYCVSRDVLRFPLELPEAIAKATSHKELESISHMGIEFWNSHLNVRGPREAPKP
QRDKEKKPDAVTSVSPADAPQTDSAHQPDSDNQLKTATRAGTDDKRAGSNPTLFHEFCPI
TTRSPRELDYGSGQGALCFINPLFLQSQTSLSRRRMFSRSLKVRISTESSSLLSPPLAPP
PPPPLMPKTKGKCNAQKRGKETVHPSKGLVEAENPGEAAQIQTVQDTRGQMQMEPGQSEA
GAIVMETLPQDSDYMQPSPMISFSNLPSLSPSLSPYVSPMAPPLFPKVSLSLSPYGSPGA
SPSLSPYQSPCLSPYDSPSASPSLSPYQSPSPSPKVPFCLSPFTSPSFLQLEEQAYHTPS
APSRPDQQSSEREAEEDGAGADVIKEEDGTKEDPHTKREQEERGLVLQMNAASLNDTDSC
SFFSSLEGAAEAPPYSAHQQDNATSL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtagagccactgtatgacttcccggagcccaaccagtcgtcagagcggaag
ttgccggggcatcaaaagggccggggctccctgagaagcgtcagcgtactggaccgtctc
ctgctcacagttcctgtctggctgcagctctccatcaacccggccaccgctctgcacata
ctgcagagggagcctcctgggaacttcctggtgcgcaagtctcgcacgtcacagagaaac
gttctgtgtgtgcgcttggcggatgacagcgtgccctcctttgttcaacaatttggcatc
agggaggaacaatccagcaaaactctgtccctggagacttcagccatcagctttccagat
ctcccaagactaatttccttctactgtgtcagcagagatgttttacgcttccctttggag
cttcctgaagccattgcaaaggcgacatcccacaaagagcttgagtccatctcacatatg
ggaatagaattctggaattcccacctaaacgtccgtgggcctcgggaggccccaaagcca
cagagagacaaggagaagaagccagacgcagtaacctcagtctcgcccgctgacgcccca
cagacggattcagcccaccagcccgactcagacaaccagctcaagacggcaactcgtgcc
ggcaccgacgacaaacgagcaggttcaaatcccaccctgttccatgagttctgtccaatc
acgacacgcagcccccgagagctggactatggctccggccagggcgccctctgtttcatc
aacccccttttcctgcagtcccagacttcgttgtccagacggcgcatgttcagccgcagc
cttaaggttcggatttccacagagtcttcaagcctgctttcgcccccactcgctcctcca
cctccaccaccgctaatgcccaaaaccaaaggaaaatgtaatgcccaaaaacggggaaaa
gaaaccgtccatcccagtaaaggtctggtagaagctgaaaacccaggtgaagccgctcag
attcagacagttcaggacacccggggccaaatgcagatggaaccgggccaaagtgaagct
ggagccatcgtaatggagactcttccacaggattcagactacatgcagccctctccaatg
atcagcttctccaatttgccatcactctctccttccctctccccatatgtttctcccatg
gcgcctccccttttccccaaagtatctctgtccctctctccttatggctctccgggggct
tctccctctctctccccttaccaatccccatgtctctctccatatgactcacccagcgct
tcaccgtccctttcaccataccagtccccatctccttctccgaaggtccccttctgtctc
tcccccttcacctctccgtccttccttcagctggaagagcaggcatatcacacgccttct
gctccttcaagaccagatcagcaaagctcagagagagaggcagaggaggatggagcaggt
gcagatgtaattaaggaggaagacggcacaaaagaggacccgcacacaaagagggaacag
gaggaaaggggtctggttttacagatgaatgctgcttcgctaaacgacacagacagctgc
agtttcttcagtagccttgagggagcagcggaggctccaccttactccgcccaccaacag
gacaatgctacaagcctctag
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