Cyclopterus lumpus (lumpfish): 117742296
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Entry
117742296 CDS
T09199
Name
(RefSeq) RNA-binding protein 4-like isoform X1
KO
K13189
RNA-binding protein 14
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117742296
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117742296
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
DbpA
RNA_bind
Motif
Other DBs
NCBI-GeneID:
117742296
NCBI-ProteinID:
XP_034405330
Ensembl:
ENSCLMG00005005605
LinkDB
All DBs
Position
14:14120622..14128350
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AA seq
539 aa
AA seq
DB search
MSGENVKLFVGNLPLDATHDELTKLFSPYGEINTCSLLRQYAFVTLKGEGAADRAIRHLD
GKEYRGRPLVVEESRARPPNSTKVFVGNLAATCSADDLHGLFSTFGRVLDCDKVKARLCS
NVGYAFVHMERKEEALVAIDALNGTMYKGRQLAVELSKAQPLINQIAMAGNSNNPGGREG
LLPRPPPSLEHHQSQAAVLAAAAAAAAGLPIQVQQSVHNSFYNTTSFDPTYAALKGITSA
KGADGVIYGALASQVYGSVADQVYQDMANHNPATVATVEESESQTGPDPTTLFEAARAKF
FQEGQKVLAEQQSGRKAASADSERDRSPIRGNRTPLLPDPVPGSFGQIRPKRRALLPTPP
GGPEETPAATNTPEGSDPVARSYTEYYQQMHQYQQYQQYQQQQYQYLQYAYTNPPPPPPP
PPATTQAQASTTAPPGTYTAPPTYAAPGAYAPPGTYDTSGSYHASSGSYSASSGNYDASS
GSYDSSGGYGAPGAYDSSGAYASAGGYSASTPYEQTAAHGQPMPQRHDYPYHTPEPPYR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgagaacgtgaagttgtttgtcgggaaccttcctttagatgcaactcacgac
gagttaacgaagctcttttctccatatggagagatcaacacctgctctttgctcagacag
tatgccttcgtcactctgaagggagagggggcagcagacagggccatacgacatcttgat
ggcaaagagtacagaggcaggcccttggtggttgaggagtcacgtgcacgcccacccaac
tccactaaagtgtttgtggggaacctcgccgcaacatgttcagcagatgacctgcacggg
ttgttctcaacctttggaagagttttagactgtgacaaagtcaaagccagattatgctca
aatgttggttatgcatttgtgcatatggagaggaaggaggaggccctggtagctattgac
gcactcaacgggaccatgtataagggccgtcagttggctgtagagctgtccaaagcccaa
cctttgatcaaccagattgcaatggctggaaattcaaacaacccaggtggcagggaaggt
cttcttccgcgaccacctccatcattagagcaccatcagagtcaagcagctgtgctagca
gcagctgcagccgctgcggctggactaccaatacaagttcaacaaagtgtccataattca
ttctacaacaccacatcctttgaccccacctatgctgctttgaagggcattacaagtgct
aaaggtgcagatggggtgatatacggtgctctagccagccaggtgtatggatctgttgct
gaccaggtgtatcaagatatggccaatcacaatcctgcaactgttgccactgttgaagaa
tcagagtcacaaactggaccagatccaacaacgcttttcgaggcagcaagagcaaagttc
tttcaggagggacagaaggttctggcagagcagcagtcggggagaaaagcagcatctgca
gacagtgagcgagatcgcagcccaatcagaggaaatcgaacccccctcctccccgacccc
gttccaggatcctttggtcagatccgacctaagcgccgtgccctactgcccacgccacct
ggaggacctgaagagaccccagcagccaccaacacacctgaagggtcagatcctgttgct
aggtcttacacagagtactaccaacaaatgcatcaataccaacagtatcaacagtaccag
cagcagcagtaccagtacctccagtatgcctacaccaatccccctcctcctcctccgcct
ccaccagccaccacacaggcacaggcctccaccacagcacctccagggacgtacacggca
cccccaacgtatgcagcaccgggagcctacgcaccgccaggaacatatgacacttcagga
agttaccacgcctcatcagggagctacagtgcttcatctggaaactacgatgcctcgtca
ggaagctatgattcatctggaggctatggggcaccgggagcatatgattcatcgggagct
tacgcatcagcgggaggctactccgcatccacaccgtatgagcagacagccgcacacggg
caacccatgccccagcgccatgattacccttaccacacgccagaacccccttatcgatag
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