KEGG   Cyclopterus lumpus (lumpfish): 117742300
Entry
117742300         CDS       T09199                                 
Name
(RefSeq) ras-related protein Rab-33B-like
  KO
K07920  Ras-related protein Rab-33B
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117742300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117742300
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117742300
   04031 GTP-binding proteins [BR:clum04031]
    117742300
Membrane trafficking [BR:clum04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    117742300
 Others
  Specific organelles associated proteins
   Auto phagosome
    117742300
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117742300
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    117742300
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU SRPRB G-alpha PduV-EutP AAA_16 Septin
Other DBs
NCBI-GeneID: 117742300
NCBI-ProteinID: XP_034405391
LinkDB
Position
1:complement(13599991..13603782)
AA seq 241 aa
MESSLEFSNSLGSVSSLLTRCRTFKVLVIGDSAVGKTCLTHRLCAADFPCRVEATIGVDF
RERQLDIHGEKIKLQLWDTAGQERFRKSMVQHYYRNVHAVLFIYDVTCPTSFSSLAAWIE
ECRQNSLGQEIPRFLVGNKGDLRDPSRTDGQVSQEQAMSFAKAHGMMCFETSAKNPPNKC
GNVRRGDGEVLYQQDKVEDIVVALGVKLKRQKKPAAANTSTHGSFKVMNKKRPEKELWTC
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagtcctctcttgagttttccaactctctgggcagcgtgtcctccctgttgactcgc
tgtcggaccttcaaggtgctggtgatcggagactccgcggtggggaagacctgcctcaca
caccgactctgcgccgcagacttcccctgcagagtggaggcgaccatcggggtggacttc
cgcgaaagacagctggatatccatggagagaaaattaagctccagctgtgggacacggcg
ggacaggagcgtttccgtaagtccatggtgcaacactactatcgcaatgtccacgcggtg
ctcttcatatatgatgtcacctgccccaccagcttcagcagcctggcagcctggatagaa
gagtgcaggcagaactccctcgggcaggaaatccccaggttcctggtgggtaataagggg
gacctccgtgaccccagcaggaccgacggccaggtaagccaggagcaggcgatgagcttc
gccaaagcccacggcatgatgtgttttgagacgtccgccaagaacccgccaaacaaatgt
gggaacgttcggcgaggtgatggagaggtgctgtatcagcaggataaggtggaggacatt
gttgttgctcttggtgtcaaactgaagagacagaagaaacctgcagccgcaaacacgtca
acgcacgggtcctttaaagttatgaataagaaaagaccagagaaagagctgtggacctgc
tgctga

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