Cyclopterus lumpus (lumpfish): 117742333
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Entry
117742333 CDS
T09199
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117742333
04082 Neuroactive ligand signaling
117742333
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742333
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117742333
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117742333
NCBI-ProteinID:
XP_034405425
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All DBs
Position
2:7610059..7628303
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AA seq
412 aa
AA seq
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MYFQQYWRDKRLAYIGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP
DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGVTR
IELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSF
WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYA
FVNYIFFGRGPQMQKKLAEKAEKANNERLLRSSGRSVVNSFFLISLSIQAEPHGHGNILL
TTLEIHNEVGGGEITTSLADIRNSQSMVQLDSTASSHIQYRKQSGGIGPRSTSRHSLDRA
AQMKRSRLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSMFNLIYWLYYV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtatttccaacagtactggagggacaagcgtctcgcctacataggaatccccctcaac
ttgaccctggataacagggttgctgaccagctctgggtccccgacacctacttcctcaac
gacaagaagtctttcgtccacggagtcactgtcaaaaaccgaatgatccgcctgcaccca
gacgggaccgttctctacggcctcaggataactacaacagcagcatgtatgatggatctc
agaaggtatccgctggacgaacagaactgcactctggagatagagagctatggctacacc
acagacgacatcgagttctactggaaaggaggcgagtcggctgtaaccggggtgacgcgg
atcgagttgcctcagttctccattgtcgattacaagttggtgtccagaaacgtagtcttt
tccacaggtgcctaccctcgactgtctctaagcttcaagctaaagaggaacatcggctac
ttcatcctgcagacgtacatgccatcgatcctgattaccatcctctcctgggtctccttc
tggataaactatgacgcgtcagcagccagagtggctctagggatcaccacggtgctgaca
atgaccacgatcaacacccacttgagggagacgctgcccaagatcccgtacgtcaaggcc
atcgacatgtacctgatgggctgcttcgtcatggtcttcctggccctgctggagtacgcc
ttcgtcaactacatcttcttcgggaggggcccccagatgcaaaagaagctggcggagaag
gcggagaaggccaacaatgagaggctgctccgttcatccggacgcagcgttgttaattcg
tttttcctcatttcgttatccatccaggcggaaccgcacggccacggaaacatcctgctg
accaccctggagatccacaacgaggtggggggaggcgagatcactaccagcttggcggac
atcaggaactctcagtccatggtgcagctggacagcacggcctcgtcgcacatccagtac
cgcaagcagagcggcgggatcggcccgcgctccaccagccggcactccctggaccgggcc
gcccagatgaagcgcagccgcctgcggaggcggtcctcgcagctcaaaatcaaaatcccc
gacctgacggatgtgaacgccatcgaccgctggtcacggatcatcttcccttcggtgttc
tcaatgttcaacctcatctactggctctactatgtctga
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