Cyclopterus lumpus (lumpfish): 117742346
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Entry
117742346 CDS
T09199
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117742346
04082 Neuroactive ligand signaling
117742346
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742346
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117742346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117742346
NCBI-ProteinID:
XP_034405467
Ensembl:
ENSCLMG00005003947
LinkDB
All DBs
Position
2:complement(7577991..7598104)
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AA seq
469 aa
AA seq
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MMVMDLHSALNNKVSRISVMARLVLSLLLLCGCQNSCCQTSTEAQKEAAANDNSTVFTRI
LDGLLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFK
GPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAE
CPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTKGASKSVVVAEDGSRLNQYHLIGQNA
GTENIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVF
GVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWD
GKKALEAQHPKKRDPMVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTSVQLRAAEAKM
VDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGVSST
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatggatctgcattcagctctgaacaacaaagtgagcagaatatcagtcatg
gcgagactcgtcctttccctcctgctcctgtgtggatgccaaaatagttgctgccagacc
tccacggaggcccagaaggaggcggcggccaacgacaacagcaccgttttcaccaggatc
ctggacgggctcctcgacggttatgacaacaggctccggccggggcttggagagaacgtc
acagagatcaagacgaatatctttgtcaccagcttcggcccagtgtcggatacggagatg
gaatataccatcgacgtcttcttccgtcagagctggaaggacgagcgcctgtgcttcaaa
gggccgatggagatgctgccgttgaacaacctgctggccagcaacatctggacccccgat
accttcttcctcaacggcaagaagtctatcgctcataacatgaccacgcccaacaagctg
ctgaggctgaaggacgacggcactttgctctacacgatgagactgaccatatcggcagaa
tgccccatgcagctggaggatttccccatggacgcacacgcctgccccctcaagtttggc
agctatgcctatccggtgtcagaggtggtctacacgtggactaagggagcgagtaagtct
gtggtggtggcagaggacggctccagactcaaccagtaccatctcattgggcagaacgcc
ggcaccgagaacatacacacgagcagagggcagtacacagtgatgatggcccacttctac
ctgaagaggaagattggatattttgtcatccagacatatatgccctgcttcatgactgta
atcctgtcccaggtgtcattttggctaaacagagaatcggttcccgcgaggactgtcttc
ggggtgaccaccgtgctgaccatgaccaccctcagcatcagtgccaggaactcgctccct
aaagtggcctacgccacggccatggattggttcatcgccgtctgctacgccttcgtcttc
tccgccctcatcgagttcgccacagtgaactacttcaccaagaggagctgggcctgggac
ggcaagaaggctctggaagcacagcaccccaagaagcgagaccccatggtgctgtccaaa
aagcccaacaacgtttgctcggcgggcgtcaactacacccccaacctcaccaaggacgtg
tccatctccaccatctccaacacgacgtcggtgcagctccgggccgccgaggccaagatg
gtggaccccaagaagacctacaacagcgtcagcaagatcgacaagatgtcgcggatagtg
ttccccgtcctgtttggaaccttcaacctcgtctactgggccacgtaccttaacagagaa
ccggtggtgaagggagtgagctcaacgtaa
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