Cyclopterus lumpus (lumpfish): 117742347
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Entry
117742347 CDS
T09199
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117742347 (supt6h)
03036 Chromosome and associated proteins [BR:
clum03036
]
117742347 (supt6h)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117742347 (supt6h)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117742347 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_9
HHH_3
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
117742347
NCBI-ProteinID:
XP_034405466
Ensembl:
ENSCLMG00005012497
LinkDB
All DBs
Position
14:complement(13136568..13152225)
Genome browser
AA seq
1769 aa
AA seq
DB search
MSDFIESEAEESEEEFDEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGEEE
GEEEEGRPRNASAAGSDSEEEVRHRRKKRNFDDRLDEDDLDLIEENLGVKVKRRKKKYDR
VKTLDDDEEDDDQKDLIADEIFHGDAEGELEEGEAVDEPLHHADEEEEGEDEESDIDDFI
VDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEGGW
DRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDE
LEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEV
PFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQFEQISADPD
KPLADGVRPLDTPDLERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNTAKPSKKRLKKIK
EVTEDGEEEELEVEEEEEEDQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGEN
LRDSYQRHETEQFPAEPIELAKDYVCSQFSAPEAVLEGTRYMVAMQIAREPLVRHVLRQT
FQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEEEGLLSIDI
CIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKEL
KSKLITEAKESIVRSCCRRLYNWLKVSPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPS
RDTPVFCALINGEGEVVDFLRLPYFMKRRNAFREDDREKKAFDIETLKKFLSGKKPHVVA
VAGENRDAQMIMEDIKRAISELEQESSVPAVGVELVDNELATLYMNSKRSEVDFREYPPL
LRQAVSIARKIQDPLMEYSQVCSSDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEV
GVDVNKSIAHPHTQSLVQFVCGLGPRKGSQLLKILKQNNTRLENRTQLVTMCHMGPKVFI
NCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGAL
EEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVAYRVPNTEEV
FNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPEL
SEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMK
IDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIKRV
IAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVAEGIYQHVDVREEGKE
NAFSLGHTLWINTDEFEDLDEITARYIQPMASFARDLLGHKYFQDGLWGKKEKMEELLVK
TKREKPTFIPYFLSACKDMPGKFILGYQPRGKPRVEYVTITPDGFRYRSQVFPTVNGLFR
WFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAA
VTGQGQNPNTTPAQWGSSQYGYGGSTGGGGGGGGGGGGGGGGGGGSSSAYHVFATPQQPI
ATPLMTPSYSYTTPSQQALGTPQYSSSTPQSSHSHAHGPPHGSHVSHHSHPGHSSHHSHS
SGTPSSSTSSRGRTPQQQQQQPPAPKASGSNASAVDWGKMAEQWLKEKEAEGRKKTQRMT
PRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttattgagagtgaggctgaggagtcagaggaggagtttgatgagaaagac
cttaagcccaaaaagacccagaggtttttggaggaagatgatgaagaggaagaagagaac
acagaggatcaggatgagcgaggaaatttacgtggactcattgatgatggagaggaggaa
ggggaagaggaggaggggcgtccaagaaatgcaagtgcagcggggagtgactcggaagaa
gaagtcaggcatcgccgaaaaaagcgcaattttgacgaccgcctcgatgaagatgatctg
gacctaattgaggaaaacttgggtgtaaaagtaaaaagaaggaaaaagaaatacgaccgt
gtaaaaacgcttgatgatgatgaagaggatgatgaccagaaggacctgatcgcagatgag
atatttcatggtgatgcagagggagagctagaggaaggcgaggctgtcgatgagcctctc
caccacgcagatgaggaggaagaaggagaggacgaggagtcggatatagatgattttatt
gttgatgatgatggccaacccatcaccaaaaagaggggcaagaaattctcaggatacaca
gacgcagccctccaggaggcccaagaaatatttggtggagactttgactttgctgacttc
gacgcagatgcatacgaccagggggaggaggaggaagaggaccaggatgaaggtggttgg
gaccgacccaagaagcaaacgaagaggaggcaggggaggaagagcatctttgagatctac
gagcccagtgagctggaaagtagtcacatgactgaccaagacaatgagatccgctctaca
gatatgcctgaaaggtttcagttacgatccattcctgttaaacctgctgaggatgatgag
ctggaagaggaagcagagtggatcttcagacatggcttctccactcttactatctccatg
caggagagcacagattatctagacagggggacaaccacaaacttcagcaggaaaggcccc
agcacaattgctaagatcaaagaggccctcaacttcatgaggaatcaacaatttgaggtc
ccattcatagctttctacaggaaagaatatgtggagcctgagctaaacatcaacgacctg
tggaaagtgtggcagtgggatgaaaagtggactcaactgaagacacggaagcagaacctt
acccgtctgtttcggaagatgcagtcttaccagtttgagcagatctcagccgacccagac
aaaccgttggcggacggcgtccgtcctctggacacccctgacctggagaggctaaaagat
gtgcagactcttgaagagctgggtgatgtgtacaaccactttctgctttactacggccga
gacatccctaagatgcagaacactgccaagccaagtaagaagaggctcaagaagatcaaa
gaagttacagaggacggtgaagaagaggaattggaggtagaagaagaagaagaagaagat
cagaaaggacctgacctcaagctggcgtctcgtagagatatgtacagcatctgtcagagc
gtaggacttgatggcttggctaaaaagtttgggttaactccagagcagtttggagaaaat
ttgagagacagttaccagcgtcacgagacagagcagttcccagctgaaccgatagagctg
gccaaagattatgtttgcagtcagttcagcgctcctgaggcagtactggaaggaaccagg
tacatggtggccatgcagattgcccgtgaaccactggtcagacatgttctccgacagacc
tttcaggagagggccaagatcaacatcaagcctacaaagaagggcaaaaaggaggtagac
gaggctcattttgcctactccttcaagtatcttaagaacaaggctgtaaaagagctgaat
ggggatcaattcttgaagatgtgcctggcagaggaggaggggctgctttccattgacatc
tgtatagaccttataggggtcaaagggtatgctggggaccaaacatactttgatgagatc
aaacaattctactacagggatgagttcagtcaccaagttcaggaatggaacaggcagcgt
actttagccatagagagagctctcactcagttcctctaccctcagatggccaaggagctc
aagagcaaactgatcactgaggccaaagagagcattgtcaggtcctgctgtcgtcggttg
tataactggctcaaggtgtctccttaccgaccagatcagcaggttgaggaagacgatgat
ctgatggatgagagtcagggcaaaggcattcgggtgctgggtgtagcctatgcgcccagc
agagatacaccagttttctgtgctctgatcaatggggaaggggaggtggtcgacttcttg
cgtctgccctacttcatgaagaggaggaatgcctttagggaggatgacagagagaagaag
gcctttgacatcgaaactctcaagaagtttctgtctggcaagaaacctcatgtggtagct
gtcgctggggaaaatcgagatgctcaaatgatcatggaggacatcaagagggctatcagc
gagcttgagcaagagtcctcggtgcctgctgttggcgtggaacttgttgacaatgagttg
gcgacactgtacatgaacagcaagagatctgaggttgattttagggaataccctccttta
ctgcgacaggctgtgtcgatagccaggaagatccaggatcccctgatggagtattctcag
gtgtgcagctctgatgatgacattctctgcctcaaactccacccactacaggaacatgtg
gtgaaggaagatttgctctgtgctctttactgtgaattcatcaaccgtgttaatgaggtt
ggagtggatgtgaacaagtccattgcccatcctcacactcagagcctcgtccagtttgtc
tgtggtctgggaccaagaaagggctcccaactgctcaagattctgaagcaaaataacact
cgacttgaaaacagaactcagctggtcacaatgtgtcacatgggccccaaagtttttatc
aactgtgccggtttcatcaagatcgacacagcatcgcttggggacagtactgactcatac
attgaggttctggatggatctcgtgtccaccctgagacgtacgagtgggctcgcaagatg
gctgtggatgctcttgagtatgatgagtcggcagaagatgccaacccagccggagctctg
gaggagatcttggaaaatccagaacgtctcaaagatctggacttggatgcctttgctgaa
gagcttgagagacagggttacggcaacaaggggattactctgtatgatatccgtgcagag
ctgagctgcagatacaaagacctgagagttgcctacagagtccccaacactgaggaggtc
ttcaacctgctcaccaaggagactcctgagaccttttatattggcaagctcatcaccagt
atagtaactggcattgctcaccggcggcctcagggagagagctatgatcaggccatccgt
aatgattctacggggctgtggcagtgtcccttctgccagcaggacaacttccctgaactc
agtgaggtgtggaatcactttgacagcggttcatgtccaggtcaggccattggggtgcgg
tctagattagataatggcgtccaaggattcattcccaccaagtttctcagtgacaaagtg
gtcaaacaccctgaggagagggtcaaggtgggcatgacagttcactgtcgcatcatgaaa
attgacattgaaaaattcagcgtcgacctcacatgccgcacctcagatttgatggacaag
gctaatgagtggaagctccccaaagacagctactatgactttgacacggagtcggaagac
caaaaacaggaggaggagctcaagaagaaacaacagcgaacaccatacataaagcgtgtg
attgcccaccccaacttccacaatattagtttcaaccaggcagagaagatgatggagact
ctcgaccagggagacttgatcatcagacccagcagcaagggagagaaccacctcacagtc
acctggaaagtggctgaaggcatctaccaacatgtggatgtgagagaagaaggcaaagag
aacgcattcagcttagggcacactctctggatcaatactgacgagtttgaagatctggat
gaaatcactgctcggtatattcagccgatggcgtcatttgccagggatctactggggcat
aagtacttccaggacggcctctgggggaaaaaggagaaaatggaggaattattggtcaag
acaaagagggagaagcctactttcatcccttactttctttccgcatgtaaagatatgcca
ggaaaattcatactgggctaccagcctcgcggaaaaccacgggttgagtatgtgaccatc
accccggatggcttccgctatcgttcacaagtattcccgacagtgaatggactattccga
tggtttaaggaccattaccaagagcctgtgccaggcatcactcccagcaacagcagccga
acaaggactcctgcatccctgaacgccaccccagccaacatcaacatcgccgacttgacg
cgagctgtcaacgccctcccacgcaacatgacctctcagatgttcagtgctatcgccgca
gtcacaggccagggccagaaccccaacaccacccccgcacagtggggctccagccagtac
ggctacggtggcagcacaggaggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaggagggagctcctctgcttatcatgtatttgccacacctcagcagcccatt
gcgacacccttgatgacgcctagctactcttacactacaccgagccagcaggccctgggc
acgccgcagtacagcagctccaccccgcagtcctcacactctcacgcacacgggcctcca
cacggcagccatgtgtcacaccacagccatcccggccacagcagtcaccacagccactca
tccggcactccgtcatcctccacctcatccagaggacggacaccgcagcagcagcagcag
cagccgccggcgccaaaggccagtggcagcaacgcctctgcagtggactggggcaagatg
gccgagcagtggctgaaggagaaagaagcagaggggcggaagaaaacccagaggatgacg
ccacgaccgtcgcccagcccaatgatcgagagcacccctatgtccatcgccggagacgcc
acacccctgctggacgagatggaccgatag
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integrated database retrieval system
