Cyclopterus lumpus (lumpfish): 117742354
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Entry
117742354 CDS
T09199
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04145
Phagosome
clum04210
Apoptosis
clum04530
Tight junction
clum04540
Gap junction
clum04814
Motor proteins
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117742354
09143 Cell growth and death
04210 Apoptosis
117742354
09144 Cellular community - eukaryotes
04530 Tight junction
117742354
04540 Gap junction
117742354
09142 Cell motility
04814 Motor proteins
117742354
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117742354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117742354
03036 Chromosome and associated proteins [BR:
clum03036
]
117742354
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117742354
04147 Exosome [BR:
clum04147
]
117742354
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117742354
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117742354
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117742354
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117742354
Exosomal proteins of other body fluids (saliva and urine)
117742354
Exosomal proteins of colorectal cancer cells
117742354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117742354
NCBI-ProteinID:
XP_034405479
Ensembl:
ENSCLMG00005006787
UniProt:
A0A8C2Z1B5
LinkDB
All DBs
Position
2:4860710..4865735
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSEKPKGGYDDSFTTFFSETGNGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTVGKEHIDNVLD
RIRKLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAERAYHEQITVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAISNIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGMDSFEEDEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagtgtatctctatccatgtcggccaggctggtgtccagatgggcaacacctgc
tgggagctgtactgtctggagcacggcatccagcccgacggccagatgcccagtgagaag
cccaaaggaggctatgatgactccttcaccaccttcttcagtgagaccggcaatgggaaa
tacgtccccagggccatctttgtcgacctggagcccactgtgattgacgaggttcgcaca
ggtacgtaccggcagcttttccacccagagcagctgatctcgggaaaggaggacgccgcc
aacaactacgcccgaggtcactacactgtcggcaaggagcacatcgacaatgtcctcgac
agaatccgcaaactgtcggaccagtgcacaggactacaagggttcctcatcttccactcc
ttcggtggaggaaccggctctggcttcacctccctcctgatggagcgcctctcggtagac
tttggcaagaagtcaaagctggagttcgccatctatccggcgccccaggtgtccacggcc
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactccgactgc
gccttcatggtagacaacgaggccatctacgatatctgccggaggaacctggacatcgag
cgcccgtcgtacaccaacctcaaccgcctcatcagccagatcgtctcctccatcaccgcc
tccctgcgcttcgacggcgccctgaacgtggacctgactgagttccagaccaacctggtg
ccctacccccgcatccacttccccctggccacctacgccccggttatctccgcagagagg
gcctaccacgagcagatcaccgtggcggagatcaccaacgcctgctttgagcccgccaac
cagatggtgaagtgcgaccctcgccacggtaaatacatggcctgctgcctgctgtaccgc
ggcgatgtggtgcccaaagacgtcaactccgccatcagcaacatcaagaccaagcgcagc
atccagtttgtggactggtgccccaccggcttcaaggtgggcatcaactaccagccgccc
accgtggtgcccggcggagacctggccaaggtgcagagggccgtgtgcatgctgagcaac
accaccgccatcgctgaggcctgggcccgactcgaccacaagttcgacctgatgtacgcc
aagcgggccttcgtccactggtacgtcggggaggggatggaggagggggagttctcggag
gccagagaggacatggccgccctggagaaggattacgaggaggtgggcatggactcgttt
gaagaagatgaagagggggaggagtattaa
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