Cyclopterus lumpus (lumpfish): 117742387
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Entry
117742387 CDS
T09199
Name
(RefSeq) interferon regulatory factor 2-binding protein 1-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117742387
04121 Ubiquitin system [BR:
clum04121
]
117742387
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117742387
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Atypical E3
117742387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
117742387
NCBI-ProteinID:
XP_034405556
Ensembl:
ENSCLMG00005004511
UniProt:
A0A8C2WVM9
LinkDB
All DBs
Position
14:20878732..20883226
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AA seq
592 aa
AA seq
DB search
MSSASQPSSRRQWCYLCDLPKMPWAMLWEFSEAVCRGCVNYDGADRIELLIETARQLKST
HGVLDGRSPGPQQGKPSSTGPLEAGRQHGERMDRGRGEYGVSSRLPNGLHRAEDVALSEG
SRHSPNTRRAIVGAVPSLHGTISHALIAQGLVAAPHGLLAPMSSSRAGATPIAVSAGPIM
GDSGRRQVVALGVGASTSALVGIDPALWRNNEVMAELNEVARCRVEGWPNRPKAVRDVLV
ALSSCVPFNVRFRKDHNLMGRVLAFDTSTSPEFELKVFVEYPAGSGMIFSGVPDLVRQMF
RDSAKDAGKAVNSGLRYVEYEKRQGTGDWRGLSELLNDGVRMFKEPPIPEVLPQLDAGLP
MATIGRSVPAKSTTRRRKASPGSENGESEGRPDHPAREPWPRGAYSGMEPLPGMAVPQEG
PPRLHSQPSPISALMGVADSLSSSQMARDSPGMSTAHSSSAGRPTSGSPSTASTSVSQAA
LGQGLSAAQSSNTSAGESTSNAQGTLLCCTLCRERLEDTHFVQCPSVPHHKFCFPCTRGF
IRSQGQGGEVYCPSGERCPLAGSSVPWAFMQGEISTILAGDGDVTVKKESDP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgcctcgcagccttcctccagacggcagtggtgctacctctgcgatctgccc
aagatgccctgggccatgctgtgggagttcagcgaggccgtgtgccggggatgtgtcaac
tacgacggggcggacagaatagagctcctcatcgaaactgccaggcaactgaagagcacg
cacggagttttagacggccggtcccccggtcctcagcagggcaaacccagctcgaccggg
ccccttgaagcagggcggcagcatggagagcgtatggatagggggaggggtgagtatggg
gtatcttctcgcctccccaatggactgcacagagctgaagatgtggcactgtcagagggc
agcagacacagcccaaacacacgccgggctattgttggggcagttcctagtctccatggc
accatatcccatgccttgatagctcaggggttagtagctgcccctcatgggcttctagcc
cccatgtcaagctccagggcaggggccacgccaatcgctgtctcagctggccccataatg
ggtgactctggcagaagacaggtagtggccctgggcgtgggagctagcacctctgctctg
gtgggtatagatcctgcattgtggaggaacaatgaagtgatggcggaactgaatgaggtg
gctcgttgcagggttgaaggctggcccaaccgccccaaagcggtccgggacgtgctcgta
gctctgagcagctgcgtccctttcaacgtgcgcttcaggaaagaccacaacctgatgggc
cgcgttctggccttcgacaccagcacatcgccagagtttgagctcaaggtgtttgtggag
taccccgctggctccgggatgatcttctcgggagtcccggacctggtcaggcagatgttc
cgcgactcggcaaaagacgcaggtaaagcggtgaactctgggctgcgctatgtggaatac
gagaagcggcagggcacgggagactggcgtgggctgtctgaactgctgaacgacggcgtg
cgcatgttcaaagagcccccgattccagaggtcctgccccagctggatgcagggttgccc
atggcaaccatcggacgctctgtaccggcaaagagcacaactcgccgccgcaaggcctct
ccgggctccgagaatggggagagtgaagggaggcctgatcacccggcaagagagccatgg
ccccggggcgcgtactccggcatggaaccgctccctggcatggctgtcccacaagaaggc
ccgccccgtttacacagccagccctcgcccatctcggcgctcatgggagtcgcagacagc
ctgagctccagccagatggccagagatagccccggcatgtcgacagcccactcctcctca
gccgggcgcccaaccagcggcagcccctccaccgcctccacctcagtctcccaggcagcc
ttggggcagggcttgagtgcggcgcagagcagcaacaccagtgccggggagtccacgagc
aacgcccagggcaccctgctctgctgcaccctctgccgagagcgcctggaggacacccac
tttgtccagtgtccctctgtcccgcaccacaagttctgcttcccctgcacccgggggttc
atccgcagtcagggtcaaggcggggaggtgtactgccccagcggagaacgctgtcccctg
gccggatcctccgtgccctgggccttcatgcagggagagatctcgaccattctggccgga
gacggagacgtgactgtgaagaaggagagcgacccttga
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