Cyclopterus lumpus (lumpfish): 117742394
Help
Entry
117742394 CDS
T09199
Symbol
rabep1
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117742394 (rabep1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117742394 (rabep1)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117742394 (rabep1)
Protein recycling
Rab4 associated proteins
117742394 (rabep1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rabaptin
Rab5-bind
HALZ
CENP-F_leu_zip
DUF6887
Fib_succ_major
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
117742394
NCBI-ProteinID:
XP_034405574
Ensembl:
ENSCLMG00005013783
LinkDB
All DBs
Position
14:7019011..7040580
Genome browser
AA seq
864 aa
AA seq
DB search
MAEQASGPPLSSQHDEVLQQRVAALEQERNEFIKLKHQLEAEFNQKRAKFKELYVSKEEE
LKRQNVVLEGAQVELSCVLDQLSHARTEVETIKTVATLSENTKQEAVDQVRSQWQEEVAS
LQAIMKESVCEYEVQFHHRLEQERAQWNQYREAVERELGELRRRLTEGQEEENLEDEMKK
AQEDAEKLRSVVMPMEHEIAALKARLTKAEDRVRELEASKVKELNHVLEAEKSCRTDLEM
YVAVLNTQKSVLQEDAEKLRKELHDVCHKLELERQQHNQLKHTWQRANDQFLESQRLLMR
DMQRIESVLSSEQLRQVEEMKKKDQEEDEEDEEERLKQVKGLQEEDVGDNTEPLEDSFLG
LSIEEPHANHSAHGSMHSLDTDVVTGGPMDPYKENLRRVQSTDSLGSSLSVQQGLGGHNH
KAKSASHLDESDFGPLVGADCSVTDTSFGETSSISSMKLTGSHFLLTKDQEKAIKAMTPE
QEETASLLSSISQAPDTAFLSPAGYRLVSDSEWNLLQQEVKNAGRKLGRRCDMCSNYEKQ
LQSIQGQEAETRDQVKKLQVMLRQANDQLERTMTEKQNLEDSVKLGNEETAAKVSAFMQR
VQESELLLSTLQQAFSDAKGNTQDQMAVLVKSREQVADELSRLQRDNESLQGKHRLHVEL
QQQEDFQMPNTVQELHGLVVQHREDLVALRTAADHMEEKLKAEILFLKDQNQAEQCLKEN
LEETLQLEIEGCKEEIDILKASFSSLKTELERIKAEKEKLQSSLAEKTETLESIQGLRIS
LERQLRELATAKSALESQVFDEKDKALRLQTELDVSEQVQKDFVKLSQTLQVQLERIRQA
ESLDRIKVILNDTDLTDINHLPDT
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaggcctcaggaccccctctgtcgtcccaacatgacgaggtgctccagcag
cgagtggccgctctggagcaggagcggaacgagttcatcaaactcaagcaccagctggag
gccgagttcaaccaaaagcgagccaagttcaaagagctctacgtgtccaaggaagaggag
ctcaagaggcagaacgtggtgctggagggcgctcaggtcgagctgagctgcgtcctggac
cagctgtctcacgcccgcaccgaggtggagaccatcaaaacggtggccaccttgtcggag
aacaccaagcaggaagccgtcgaccaggtccgcagccagtggcaggaggaggtggcctcg
ctgcaggccatcatgaaagaatccgtgtgtgagtacgaggtccagtttcaccaccgtctg
gagcaggagcgggcccagtggaaccagtatcgggaggcagtggagagggaactaggtgag
ctgagacgccgcctcaccgagggccaggaggaggagaacctggaagacgaaatgaagaaa
gcgcaggaagatgcagagaagttgcgttcagtggtgatgcccatggagcacgagatcgct
gccctgaaagccaggctgactaaagccgaggacagggtgagggaactggaggcctccaag
gtgaaggagctcaatcacgtcctggaggccgagaagtcgtgtcgtaccgacctggagatg
tacgtcgccgtgttgaacactcagaagtccgtcctgcaggaagacgcggagaaactacgg
aaagagctccatgatgtctgtcacaagctggagttggagcggcagcagcacaaccagctg
aaacacacgtggcagagagccaacgaccagttcctcgagtcccagcgtctcctcatgagg
gacatgcagcgcatcgagagtgtgctgtcctcggaacagctccgccaggtggaggagatg
aagaagaaagaccaggaggaggatgaggaggatgaggaggagaggctgaaacaagtgaag
gggctgcaggaggaggatgtgggagacaacaccgagcctctggaggattctttcctcggg
ctgagtatcgaggagcctcatgccaaccacagcgcccacggctccatgcactctttagac
actgacgtggtgacgggcggccccatggatccctacaaggaaaacctgcggcgagtccag
tcaacggacagcctcggctcctcgctgtccgtccagcagggcctcggcggccacaaccac
aaggccaagtcggccagccacttggacgagtcggactttgggcccttagtgggggccgac
tgcagcgtgacggacactagcttcggcgaaacctcgtccatcagctccatgaagctgacg
gggagccacttcctgctgactaaagaccaggagaaggccatcaaggccatgacgcctgag
caggaggagacggcgtcgctgctgtccagcatctcccaagcaccggacaccgccttctta
tcgccggcgggctacaggctcgtcagcgacagcgagtggaacctgctgcaacaagaggtg
aaaaacgccggcaggaagctcggccgacgttgtgacatgtgctccaactacgagaagcag
ctgcagtccatccaaggacaagaggccgagacacgagaccaggtgaagaaactgcaggtg
atgcttcgtcaggccaacgatcagctggagaggacgatgacggagaaacagaatttggaa
gattcggtcaaactgggcaacgaggaaactgccgctaaggtgtccgccttcatgcaaaga
gtccaggagtcagaactgctgctcagcacacttcaacaggccttcagtgatgcaaagggg
aacacacaggaccagatggcggtgctggtgaagtcgagggagcaggtggcagacgaactg
agccgactgcagagagacaacgagagcttgcagggaaaacacaggctgcacgtagaactg
cagcaacaggaagatttccagatgcccaatactgtgcaagagctccatggcctggtggtg
cagcaccgcgaggacctggtggcgttgcggacggccgctgatcacatggaggagaagctg
aaagctgagattctgtttctgaaggatcagaaccaggcggagcagtgtctgaaggagaac
ctggaggagactctgcagctggagatcgagggctgtaaggaggagatagacatcttgaaa
gcgtcgttctccagtctgaagactgagctggagcgaataaaggcggagaaggagaagctg
cagagcagtctagcggagaagaccgagacgctggagagcatccagggcctgaggatcagc
ctggagcgccagctaagagagctcgccaccgcaaagagcgcactagagagtcaggtgttt
gacgagaaagacaaagctctgcgactgcagacggagctggatgtcagcgagcaagttcag
aaggactttgtcaaactttctcagacccttcaggtgcagctggagcgaatacgacaggcg
gagtcgttggaccgaatcaaagtcatcctcaatgacaccgacttgacggacatcaaccac
ctcccggacacatga
DBGET
integrated database retrieval system
