Cyclopterus lumpus (lumpfish): 117742395
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Entry
117742395 CDS
T09199
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117742395 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117742395 (supt20)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
117742395 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
117742395
NCBI-ProteinID:
XP_034405577
Ensembl:
ENSCLMG00005016279
LinkDB
All DBs
Position
14:12245018..12257552
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AA seq
848 aa
AA seq
DB search
MWEFLLSLICSVYSYFPKQQVLEYALDRAEYIVESARQRPAKRRISSGGRKSLYQKLYEL
YIEECEKEPELKNLRRNVNLLEKLVSQESVSCLVVNLYPGNEGYSLMLRGKNGSDSETIR
LPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIVEVRDYRQSGNTKMPTYQSRH
ILLRPTMQTLICDVHAMTSDHHKWTQDDKLQLESQLILATAEPLCLDPSISVTCTANRLL
YNKQKMNTRSMKRCFKRHSRASLNRQQELSHLPPQLRLYDYLQRRKERKPAPAADLKISK
IGNCVDMWKQSNCQLTVPKEIDVEKYAVVERSLQLEDSQPTTVIWPAEEIVDDYTFECEV
GGQPKMTKVSIFQSMGDPLVYGKIYCAKEPKAEEDNSDLKLIHSPFLIGSKIDADRFLTQ
YKGVYESDVKCEVKMSHNSGSVGQGPLSPSKDEGDGISPLVQTSVLGKGVKHRPPPIKLP
SGSGNSSSGNTYSSQITSGLLKCPTPPPAKSQSLNRKHSMELSQVGLLSPASLSPMGSTQ
RSGTPKPSTPTPTNTPCSTPHPTDSLCAPLSLTPTPSDPPMLQSLSQPALLTPFSQQQLA
LSQPLPVMTIPLPTMGTSITTGTTSPQVMANPTGLNFINVVSSVCSPQNLMSGSNPMLGP
GLNLSGILPTGGLMPTMQSAAQAGSPFGLNSSAGLRPLNLLQIPTGPLIFNSLQQQQLSQ
FSPQQSQSATSSPQQQGEMGDQGSDQSLGNQQTAVINLGVGGFMSSQAAVLSQLGCGLDG
SGPLLPSPRLQQQHQPQIQLQFLQHQMQQQQMAMGAAAAPQGGAPRQHTASQPRSKRKRS
MPQPLPKS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagtttctattgtcacttatctgttccgtttactcttatttcccaaagcaacaa
gttttggaatatgcattggatcgagccgagtacattgtggaaagtgctcgacaacgacca
gccaaaagaagaatttcatccggtgggaggaagagtttgtatcagaagctctatgagctg
tacatagaggaatgtgagaaagagccagagttaaagaatttgaggagaaatgtgaattta
ctggaaaagctggtgtctcaggagtccgtatcatgtctggtggtcaacttgtaccctggg
aatgaaggctactctctaatgctcaggggcaaaaatggatctgattctgagaccatccgt
ctgccatatgaagaaggagaactcctggagtacctagatgcggaggagttgcctcctatt
ctggtggatctgttggagaaatcgcaggtgaacatcttccattgtggctgtgtaatagta
gaggtgagagactacaggcagtctggtaataccaagatgcccacctatcagagcagacat
atcctgctgcggccaaccatgcagactctgatctgtgatgtccatgccatgaccagtgac
caccacaagtggacacaggatgacaaattacaactggagagtcagttgattttggccaca
gctgaacccctgtgcctggacccctccatttctgtcacctgcacagccaatcgactgctc
tacaacaaacagaagatgaacactcgctccatgaaacggtgtttcaagaggcactctcga
gcttcactaaacaggcagcaggagctttcccatctgccaccacagctcagactctacgac
tacctgcagaggaggaaggagaggaaacctgctcctgctgcagaccttaagatctcaaag
atcggaaactgtgttgacatgtggaagcagagcaactgccaactaactgtaccgaaggag
attgatgtggaaaagtatgctgtggttgagagatcgctgcagttggaggactctcagccc
accactgtgatctggcctgctgaggaaattgtagatgactacacatttgagtgtgaagtt
ggaggccaacccaagatgaccaaggtgtctatcttccagtcgatgggagacccgctggtg
tatgggaagatctactgtgctaaagaaccaaaagccgaagaggacaactctgatctaaag
ctcatacattcccccttcctcataggctccaagatagatgcagatcggtttcttactcag
tacaaaggagtgtatgagagcgatgtgaagtgtgaggtcaagatgtcccataactcaggc
agcgtgggacaggggcctctctccccgagcaaagatgagggtgatggtatttctcctcta
gtccagacgtctgttttgggaaagggggtaaagcatcgaccccctccaatcaaactgcct
tctggatcaggcaacagctcctcaggtaatacatatagttcacaaatcaccagtggtcta
ctcaagtgtcctacgccccctccagccaaaagccagtctctgaacaggaagcactccatg
gagctgagccaggtgggcctgctgtcacctgcctccctctcccccatgggctccacacag
agatcggggacccccaagccatccacccccacacccaccaacacgccgtgctcgaccccg
caccccaccgactccctctgcgctcccctctcattgacccccaccccttcagaccctccc
atgcttcagagtctgtcgcagcccgccctcctcacgcccttttcccagcagcaacttgct
ctaagccaaccgctgcccgtcatgacaattcccctgcccaccatgggcacgtccatcacc
acgggaaccacctcgccgcaggtcatggccaacccgacggggctcaatttcatcaacgtg
gtcagctccgtgtgcagtcctcagaacttgatgagtggctctaaccccatgctgggtcca
ggccttaacttgagtggaatccttccaaccggaggactgatgcccaccatgcagtctgca
gcacaggctgggagtccttttggcctgaacagcagtgctgggttgagaccactgaaccta
ctgcagatccccactggtcctctcatctttaactccttgcagcagcagcagttgtctcag
ttctccccacagcagagtcagtcggccacctccagccctcaacagcagggggagatgggc
gaccaggggtcagatcaaagtttaggaaaccagcaaacagcggtcatcaacctgggagtc
ggagggttcatgtcttcacaggcagccgtgctgtcccagttgggctgtgggctggacggg
tctgggcccctgctgccttctcccaggcttcagcagcagcaccagccacagatccaattg
caattcttgcagcaccaaatgcagcagcagcaaatggctatgggagcagcagcagctcct
caggggggagcaccacggcagcataccgccagccaaccaagaagtaagaggaagaggagc
atgccacagcccctcccaaagtcatga
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