Cyclopterus lumpus (lumpfish): 117742396
Help
Entry
117742396 CDS
T09199
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117742396 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117742396 (exosc8)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117742396 (exosc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
NYN_YacP
Motif
Other DBs
NCBI-GeneID:
117742396
NCBI-ProteinID:
XP_034405585
Ensembl:
ENSCLMG00005016445
LinkDB
All DBs
Position
14
Genome browser
AA seq
277 aa
AA seq
DB search
MAAGFKVAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKVGNTTVIC
GIKAELTNPTVEAPGKGYIVPNVDLPPLCSSQFRPGAPGEQAQAASQFIADVIESSEVIQ
TEDLCIERGKLCWVLYCDMMCLDYDGNLLDACIIALLAALKNTQLPEVTISTETSSPEVN
LEKRRRLHIHKHPVAASFCVFDDSILIVDPTAEEESLSTAHITVVTDDEERLCIVHKPGG
TPLSGEKLQECINRATARQREIQKLVDKVVHSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaagttgctgagcctctggagtaccacaggagctttctgaaagaa
aactgtcgtcctgatggacgggagctgtcagagttcagaaccacaacactgaacataggg
tccatatccacagcagatggctcagccctggtgaaggttggaaacaccacagtcatctgt
ggcatcaaagcggagctgacaaacccaacagtggaggcaccaggtaaaggttacatcgta
cccaacgtggacctgccgccgctgtgttcctcacagtttcggcccggtgcaccaggagag
caggcgcaggcggccagccagttcatcgctgatgtaatagaaagctctgaggtgatacaa
acagaggacttgtgcattgaacgaggaaagctctgctgggtgctctactgtgacatgatg
tgtctcgactacgacgggaacctgttggatgcttgtatcatcgccctgctggctgccctg
aagaacacacaactcccagaggtcaccatcagcacagagacgagttcaccagaggtgaat
ttagaaaagagacgcaggctgcatattcacaaacatccagtcgccgcctctttttgtgtc
tttgacgactccatactgattgtagaccccacagctgaggaggagagtctgtctaccgct
cacatcactgtggtgacagatgatgaagagcgactctgcattgtccataaaccaggtggg
acgccactgtcgggagagaagcttcaggagtgcatcaacagagcgacagcgagacagaga
gagatccagaaactcgttgacaaagtcgtacacagtgtgaagacggcacaataa
DBGET
integrated database retrieval system