Cyclopterus lumpus (lumpfish): 117742402
Help
Entry
117742402 CDS
T09199
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117742402 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117742402 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117742402 (ncor1)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117742402 (ncor1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
117742402 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
117742402
NCBI-ProteinID:
XP_034405599
Ensembl:
ENSCLMG00005005658
LinkDB
All DBs
Position
14:complement(18134136..18182300)
Genome browser
AA seq
2503 aa
AA seq
DB search
MSSSSGYPPTQGSFSSEQNRYPPHSVQYTFSGSRHQQDFTVPDYRAHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSLSALSDHEALEAKRPRMETVVEGHIIRTPTTAGGIVL
PLTHSVQDGLRASADVKKDSQYSVKGDSMSSGGPALHMGDDQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEVEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKVLEGFGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKDGRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVRFINMNGLMDDP
MKVYKGRQFMNVWNEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLHYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEDKSDEKIEEEKTEKSEKKEDEEKKDEEEKDDKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPTA
PEPTLPDPPQLPKSDPMLKSMKEPAKPQTPVASMDANKAGAGETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEG
LAVASPDDDDDDDNADDSEGADNSSDTESAPSPSQSGDSKRADSAAGDAQCSDQDKGQAS
NGKALEPLYRGLCVKEEKSPESETGSQEEKAKMASYAGSVHPKTEPQDVDMKTGEVQIKM
EPDIRERGEKGDHSERHRELHSDNDSSATCSADEDVEAEPERPRMFSMDKPTLLNPPGSV
LVSSPKQTQLNIQQMQQRAASIPPMVPGPFGPSGVPISGFAMLQHQIKAVHDSAHQEEKQ
RQDQGDLERRQPFNTRSPTVIDRDGKPLPYMPYDMKLALDQEVHSGRPGSPYRLSPRELS
KALPQPDPNAPNASRYSVPPVLHPAANQLVQSMPDGVRVTFSRPSRPPNIPSPPPLIPTT
KPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGSKSTVGSISLGLPRQQDPNNKPGGAVS
SIQDGRSNQAKVGEGLTMRGSITQGTPALPQSSIAADLLKGTITKLATEDLSNPDKSRGE
QLSKGHVIYEGKSGHILSYDAIKNPRENTRSPRTAHELKRTYDMIEGPMGRGHPGREGAP
FEGLISRALPREGLHGDPKERQLITGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSF
EGGIGKGKPYEGVNTIKEMGRSIHEIPRQDQPGQDLCKTPDLSDRRAMEGSMSQIHPLNQ
STIKHNVKSLITSPSKLPHSMPQLEAMERAKYEESKAVRHTVVNSTGSVLRSTHQEASKS
QLSPSMYEDPNARRTPVNYSTNPGSRGSPMLGRGPEGVMSSVKSAGHERKSAITPTQRDN
VPAKSPVLGGDPHPVASHSPFDPHHRPVGPGEVYRPHLPPHLDPAMAMTLHRGLDPAFMF
PRQPSPTGYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPVALPYAAG
ARGIIDLAQMPPTILLPHPGGTGTPTLERMAYLPGAQPPFPSRAFNPTSISPGHQAHLAA
AAAASAEREREQRDREQQEKEREKEREREHRERERDREREREMRERERERERERERANEY
IRGGGPEQPGSRGYLHSASPSLRTQDVVVQQRPSIFQGKSVITALMPHSAAVSAAAQSSS
RYSTAADALAALVDAAASAPQMDVAKVKESKHERDDEMSSSAVVRRAASLSEQQQQQLQQ
QQQQLQQQQQQQQQQQLQQQQQLLLQQQQLQQQQLQQQQLQQQQQQQQQQQQQQEAERRS
MQSPYGAMSLPGGKPHPAYSEGPGVKDKGPQTSKSRIEEELRTRGKTTITAANFIDVIIT
RQIASDKDSRERGSQSSDSSSSLSSSRYDNTAGGTIEVISPASSPVQPQQDKPEEGQQQA
ASMNTPTPFEHMIFSTGMRGYDMSRYRPSGEPPQPSSQQPPSSQAESYSQVTKTHRVMTL
ADHISHIITQDFARNQDPPPVSSSSSATFQSTGPPVSSSGRAKMASRYSPENQVQASHHQ
RPSSRVSPENAPDKSRSRPGKSPERGGRQMENYEPISPPQSYQGMDKQEAIGPPPQRREA
DNSEIRNDSRSPGSVSYLPAFFTKLENTSAMVQSKKQEIFRKLNSNSGVGDSDLGNAQPG
TEIFNLPAVTSSSSINPRNHSFSDPANNLGLEDIIRKALMGNLEERPEEHQGGLGAMNNT
PGQGSDARQEANPSPSMGKQKHSKANSRKTKSPNLGQAYAGGERPSSVSSVHSEGDYHRQ
AQAQAQWGWDDRPSSTGSMQFPYNPLTMRILSSTPPTSIASPSIQSQQQQQQQQQQQQQQ
QQQQQQQQQQQQQPPPAGAPVAQQRVWQSLLSEQYETLSDSDD
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccccacccaggggagcttcagcagcgagcagaaccgc
tacccaccacattctgtccagtacaccttctccggctcgcgccaccaacaggatttcacc
gtcccagactatcgggctcacatgcaagatccacagggtcggagaagaccgtctctgctg
tccgaatttcaccccggaaccgaaaggcctccagagaggcgccatggttacgaacagcag
ttccactccctctcagccctgtcggatcatgaggccttggaggccaaacgccctcgcatg
gagactgttgtcgagggccacatcatccgcacgcctaccactgctgggggtattgtcttg
cccttaacccactcggtacaggacggtctaagagccagtgcggatgtcaaaaaggactct
cagtactctgtcaaaggggactccatgtcgtcagggggacctgcactacacatgggcgac
gatcaggacgcttctccttccaaactatccaaagaggagctgatccagagtatggaccgt
gtggaccgagagattgcgaaagtggagcagcagattttcaagctgaagaaaaagcagcaa
caactggaggtggaagcagcaaagcctgtggagccagaaaagcccgtgacccctccccca
gtggagcacaagcatcgcagcatcgtccagatcatctacgatgagaaccggaaaaaagcg
gaagaggcccacaaagtactggaaggttttggccctaaggtcgagctgcccctctacaat
cagccatccgacacaaaggtgtaccatgacaatatcaagaccaaccaagtcatgcggaag
aagctgattttgttttttaagaggaggaaccacgctcgtaaacaaagggaacagaagatc
tgccagcgctacgaccagctgatggaagcgtgggagaagaaggtggagcgaatggagaac
aaccccagacgcaaagccaaggacggcagaacacgggagtactacgaaaggcaattccct
gagatccgcaagcagagggagcagcaggagcgcttccaaagggttggacaaagaggaacg
ggcctttctgcaacaattgcaagaagcgagcacgagatctctgaaatcatagatggcctt
tctgagcaggagaacaacgagaaacagatgagacaactgtcagttattcctcccatgatg
tacgacacggagcagaggcgagtgaggttcatcaacatgaacggcttgatggacgacccg
atgaaggtttacaaaggccggcagttcatgaatgtttggaacgaacacgaaaaggagatc
tttaaggagaagttcgtccaacaccccaagaactttggcctgattgcgtcctatctggag
agaaagtgtgtggctgactgtgtccttcactactacttgaccaagaagaaccacaactac
aagacgctggtgaggcgaaactatggaagacggagaggaaggaaccagcaaataactcgt
ccctcacaagaagacaagtcagacgaaaaaatcgaagaggaaaaaactgagaaatccgag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgataaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgacgtaagggaaggatcacc
acacgctccatggccaatgaggctgcatctgtggctgctgaggaggctcctcccactgcc
cctgagcctaccttgccagatcctccgcagctccctaaatctgatccaatgctaaagtcc
atgaaggagcctgcaaagccccagactccagtagcttccatggacgctaataaagctggt
gctggtgaaactggagaaacttctcgctggaccgaggaggagatggaggtcgccaaaaaa
gggctagttgagcacgggcgaaactggacagccattgccaaaatggtgggaaccaaaagc
gaggcacagtgcaagaatttctatttcaactacaagagacgtcacaacctggacaacctg
ctccagcagcataagcaggacacacggcgggctcgtgctgataggtctcaaggtgaaggt
ctagccgtggcgtcacctgatgatgacgatgatgacgacaacgcagatgacagtgaaggt
gctgacaacagctctgatacagagagtgctccctccccttcgcagtctggcgactccaag
agggcagacagcgctgcaggagatgctcaatgctcggaccaggacaaaggtcaggccagt
aatggaaaggccctggagcccttatacagaggactctgtgtcaaggaagagaaaagccca
gaaagtgagactggatctcaggaggaaaaggccaagatggcttcctatgccggctcggtg
catcccaaaacggaacctcaggacgtggacatgaagaccggagaggttcagatcaagatg
gagcctgacatcagggagagaggagaaaagggagatcatagcgagaggcacagggaactc
cactcagataatgactccagcgccacctgcagtgctgacgaggatgtggaagcagagcct
gaaagaccgagaatgttctccatggacaagccaacattgctcaaccctccgggctctgtg
ctggtgtcctcgcccaagcaaactcaactcaacatccagcagatgcaacagcgggctgct
agcatcccacctatggtgcccggtccgtttggccccagcggtgtgcccatcagtggcttt
gccatgttgcaacaccagatcaaagcggtgcacgactctgcgcaccaggaggagaagcag
aggcaggatcagggagacctggagcgcagacagcccttcaacacccgcagccccaccgta
atagacagagatggtaagcccttaccctacatgccttatgacatgaagctggctctggac
caggaggtccactctggtcggccaggctctccctacagactctcccccagggagctgagc
aaggccttaccccagcctgaccccaacgcccccaatgcctcccgctacagtgtgccacca
gtcctccaccctgccgccaaccagctggtccagagtatgccagatggagtccgcgtgacg
ttcagcagacccagtcgacctcccaacattccttctcctccgccactcattccaaccacc
aagcccacggacaagccctccttcatccaggggggctccatctctcagggaactcctggc
acatacctgccgtcccacgcggtctatgggccagagggcagtaagagcacagtgggctca
atctctctgggtcttcctcggcagcaggatcctaacaacaagcctggaggcgcagtttca
tccatacaggacggcagaagcaaccaagcaaaggtgggcgaggggctgacaatgagagga
tctatcactcagggcacaccggccctgccccagtccagcatcgctgcggacctcctgaag
ggcaccatcacaaagttggccacagaggacctgagcaacccagacaagtcgaggggagag
cagctatctaaaggtcatgtcatctatgaaggcaagagtggtcacatactctcgtatgat
gctatcaagaaccccagggaaaacacccgtagccccagaaccgcccacgagctgaagcgc
acttacgacatgatagagggacccatgggcaggggacaccctggcagggaaggagctcca
tttgaggggttgatcagcagagccttgcccagagaaggtctacatggagatccaaaggaa
agacaattgatcacaggatctatcatgcaaggaacaccgaggaccgccgcggagacctat
gaagatgccatgaaatatggaaaacagataaagcgagagagcccaccgatccgctccttc
gaagggggcattggcaagggaaagccctatgagggagtcaatactatcaaagagatggga
cgctccattcacgaaatccccagacaagatcagcctggccaggacctctgcaagacccct
gacctgtcagataggagggctatggagggctccatgtctcagattcaccctctcaaccag
tctactatcaagcacaacgtcaagtccctaatcaccagtccctcaaagcttccccacagc
atgccccagctcgaggccatggaacgtgccaaatacgaggaaagcaaggcggtgcgccac
actgtggtcaactccaccggctctgtcctgcgctccacacaccaggaggctagcaaatcc
caacttagcccaagcatgtatgaggaccccaacgctcgcaggacccccgtcaactacagc
accaatcccgggtccaggggatcacccatgttgggacgtggaccagaaggtgttatgagt
tctgtgaaatctgccggtcatgaaagaaagagcgccattaccccgacacagagggacaat
gtcccagccaagtccccagtgttgggtggtgaccctcaccctgtagcctctcacagcccc
tttgacccccaccaccggcccgtcggtcctggggaagtgtacagaccccacctgcctcca
cacctcgatcctgccatggccatgaccctccacagagggctggatcctgcgttcatgttc
cccaggcagccgtctccaacaggctaccacaacacctaccagctgtacaccatggagaac
acgcggcagacgatcctcaatgattatatcacttcccagcagatgcaagtcatccgacct
gacatggctcgagggttgtcaccacgggaacagcccgttgctctcccttacgcagccggt
gctcgagggattattgatctagcccagatgcctccaactatcctgttgcctcaccctggg
ggaacaggtactcccactttggaacgcatggcctacctccctggagctcagccccctttc
ccttctagggctttcaacccaacctccatatcgccaggccaccaagcccaccttgctgct
gcagctgctgccagtgcagagagggagcgggagcagcgtgaccgcgagcagcaggagaag
gagagagaaaaggaaagggaaagggagcaccgggagagggagagggatcgggaacgggag
cgggaaatgcgagagcgagagcgagagcgagagcgagagcgggagagagccaatgaatac
atccgcggaggtggaccagagcagcctggaagtcgaggttatctgcactccgcttctccc
tcgctgaggacgcaggatgtagtggttcagcagcggccgagcatcttccagggcaagagt
gtcatcaccgctctaatgccccattcagcagcagtgtcggcagcagcacagagtagctca
cgctacagtactgcagctgatgctctggccgctctggtggatgccgctgcctctgccccg
cagatggatgtggccaaggtgaaggagagcaaacacgaacgggatgacgaaatgtcttca
tcggctgtcgtccggcgagcagccagcctctccgaacagcagcagcagcaactgcagcag
caacaacagcaactgcagcagcagcagcaacagcaacaacaacaacaactgcagcaacaa
caacaactactactacagcagcagcaactacagcagcagcaactacagcagcagcagcta
cagcagcagcaacaacaacaacaacaacaacagcagcagcaggaggcagagaggcggtcc
atgcagtccccatatggcgctatgtctctgccagggggaaaaccccatccagcttactct
gagggccctggcgttaaggacaagggtcctcaaacctctaagtcccgtattgaggaggag
cttcggactcgtggaaagacaactatcacagccgctaacttcatcgatgtcatcatcaca
cggcagatagcctcggacaaagactcacgagagcgaggctctcagagctctgactcctct
agcagcttgtcatccagtcgctacgacaacaccgctggaggaaccattgaggtgataagc
cctgctagttccccagtccagccacaacaagacaaaccagaggaagggcaacaacaggca
gcaagtatgaacacaccaactccgtttgagcatatgatattttcgactggcatgcggggc
tacgacatgagtcgttaccggccatcaggggagccaccacagcccagttcccagcagccc
ccatcctcccaggctgagagctactcccaggttaccaagactcaccgagtcatgaccttg
gcagaccacatttcgcatattataacccaggacttcgcccggaatcaggaccctcctcca
gtctcctcttcatcttcggccacattccagagcacggggccacccgtttcctcttcaggg
cgagccaagatggccagtcgctacagtcctgagaatcaggtccaggcctcacaccaccag
agaccctccagcagagtttccccagagaatgcccctgacaagtctagatccaggccgggt
aaatctccagagcgaggcggtaggcagatggagaactatgaacccatctcacctccacag
agctaccaaggcatggacaaacaggaggcgatcgggcctccaccccagaggcgagaggct
gacaactctgagatcaggaatgactcgcggtccccagggagtgtcagctatctgcctgcc
ttcttcaccaagctggagaacacctcggctatggtgcaatcaaagaagcaggagatcttt
cgtaagttgaactccaactctggtgtcggtgattctgatcttggaaacgcacaaccaggc
acagagattttcaatttgcctgctgttaccagctcaagcagcatcaaccccaggaatcac
tcatttagtgacccggccaataacttaggcctggaggacatcatccgcaaagccttgatg
ggcaacttggaggagagaccggaggagcaccagggagggctcggtgccatgaacaacaca
cccggccaaggcagtgacgcccgccaggaggccaacccgtcacccagtatggggaagcag
aagcacagcaaagccaacagccggaaaaccaagtcccctaaccttggtcaggcctacgct
ggaggggagcgtccgtcttctgtgtcctccgtccactcggagggagattatcacagacaa
gcccaagcccaagcccaatggggctgggacgaccgaccttcgtccacaggatccatgcag
ttcccttacaacccactgaccatgcgcatactgagcagcacgccacccacctccatagct
tccccctccatacagagccagcagcagcagcagcagcaacaacaacaacaacaacaacaa
caacaacaacaacaacaacagcagcagcagcagcagcagccgcctcctgctggcgccccg
gtggcccagcaacgtgtgtggcagtctctgctgtcagagcaatacgagaccctgtctgac
agcgacgactga
DBGET
integrated database retrieval system
