Cyclopterus lumpus (lumpfish): 117742413
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Entry
117742413 CDS
T09199
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117742413 (gabra1)
04082 Neuroactive ligand signaling
117742413 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742413 (gabra1)
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117742413 (gabra1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
117742413
NCBI-ProteinID:
XP_034405636
Ensembl:
ENSCLMG00005017336
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All DBs
Position
14:7769703..7790734
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AA seq
461 aa
AA seq
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MCGRSRTAFVFLWAGLLVTNGVLGGKSAGQNGMTDEQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHEMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTQAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYI
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPAPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMDPH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacgaagcaggacggcctttgtgtttctgtgggctggcttgcttgtcaccaat
ggcgttctgggtgggaaaagcgctgggcagaacggcatgacagatgaacagaaagataac
acaacagtgttcaccaagatcttagacagtcttctggatggctatgacaatcgcctcagg
ccaggactaggagagcgtgtaaccgaagtcaagactgacattttcgtgactagtattgga
cccgtttcggaccatgaaatggagtacaccattgatgtattcttcagacagagctggaag
gatgaaaggttaaagtttaaaggacccatggccgtactgcgtcttaacaacctgatggcc
agcaagatctggacccccgacaccttcttccacaatggcaagaaatcggtggctcacaac
atgaccatgccaaacaaactactgcgaattacagaggaaggcacactgctgtacaccatg
aggcttacagtaagagcggaatgccccatgcacctggaggacttccctatggatgctcat
gcttgtccactgaagtttggcagctatgcctacactcaagccgaggtggtttatgtgtgg
accagaggggctgcccaatccgtggtggtggcagaggatgggtccagattaaaccagtac
gatctgatggggcagagtgtggattccggtgtggtccagtccagcacaggagagtatatt
gtgatgacaacccacttccacctgaaaaggaaaattggttactttgtgatccagacatat
ctaccttgcatcatgacagtcatcctctctcaagtgtctttctggctcaacagagagtcc
gtccctgccaggactgtctttggagtgaccactgtcctgaccatgaccacactcagtatc
agtgccaggaattctctccctaaagtggcctatgccaccgctatggactggttcatcgct
gtgtgctatgccttcgtcttctcggccctcattgagttcgccacagtcaactacttcacc
aagaggggttacgcctgggatggaaaaagtgtggtgccagagaagcaaaagaagaagaag
gagtccctcctcaagaagaacaacactacagcctacccagctgccactgctacagccttc
gcccccaatattgccagggaccctggattggccactattgccaaaagcgccccagcaccc
ccaactgagcctaaggaggagccaaagcccaagcctccagaggccaagaagacctttaac
agtgtgagcaagatagacaggattgccagaatagccttcccgttgctctttggaaccttt
aacttggtctactgggcaacctacttgaataagaagcccaaattgcaggggatggatcca
cactaa
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