Cyclopterus lumpus (lumpfish): 117742446
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Entry
117742446 CDS
T09199
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117742446 (capns1a)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C2: calpain family
117742446 (capns1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Gag_FV_central
Cbm74
Motif
Other DBs
NCBI-GeneID:
117742446
NCBI-ProteinID:
XP_034405707
Ensembl:
ENSCLMG00005003909
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All DBs
Position
14:20702416..20708960
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AA seq
216 aa
AA seq
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MFFAKRFISGVIDVVSNIDTNQFLPSDPPPPRRPVVYAEQHESDEEKQFRRVFQQLAGED
MEVSPTELMDILNRIITKHGDLKTDGFSIESCRSMVAVMDSDSTGRLGFHEFKQLWDNIK
KWQGVYKTYDADGSGVIGADELPNAFRAAGFPLNDQLFSMIIRRYSDESGNMDFDNYIGC
LVRLDAMCRAFKTLDKDNNGTIKVNVQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgccaagagattcatcagtggcgtcatcgatgttgtcagcaacatcgacaca
aaccagtttttgccttctgatcctcctccaccacgcaggccagttgtatatgccgagcag
catgagagcgacgaggagaaacagttccgcagggtcttccagcagctcgccggagaggac
atggaagtgagcccgacagaactgatggacatcctcaacagaatcattacaaagcatgga
gacctgaagacggatggtttcagcattgagtcttgtaggagcatggtggcagtcatggat
agtgacagcactgggagactcggctttcatgaattcaaacagctctgggacaatataaag
aaatggcagggagtgtacaaaacctatgatgcagatggttctggtgtcatcggagcagat
gagttgcccaacgcgttcagagctgctggcttccccctcaatgaccagctgttcagcatg
ataatccgcagatacagtgacgaaagcggcaacatggattttgacaactacattggctgc
cttgtgaggctggatgccatgtgccgtgccttcaaaaccctggataaggataacaatggg
actatcaaagtcaacgttcaggagtggcttcagctgaccatgtactcttga
DBGET
integrated database retrieval system