Cyclopterus lumpus (lumpfish): 117742471
Help
Entry
117742471 CDS
T09199
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117742471 (tbc1d8b)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117742471 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
117742471 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117742471
NCBI-ProteinID:
XP_034405757
Ensembl:
ENSCLMG00005019549
LinkDB
All DBs
Position
14:complement(15842992..15855471)
Genome browser
AA seq
1133 aa
AA seq
DB search
MWLKPDEILLKNAFKLWVTEEDNKYFVLQRRRGYGEGGGGLTGLLVGTLDTVLDSTSKVA
PYRILHHTPDSQVYWSIACGVTKEEIVQHWDWLQQTIMRTLSVFDSSEDITSFVQGKIRG
LIAEEGKTSLVLEEDPEKFREALLRFEKWFELPPKEKLVTYYSCSYWKGKVPCQGWLYLS
TNFMCFYSYLLGAEVKLIISWDEIWRLEKTSNVILTESIHVLVHGEDHYFSMLMHLNETF
VIMEQLADYSIKRLFDKEAFQREPALSDPLQITKRGLEAHAKSEQFRTFFRLPKEENLLE
VHESFLWVPFSHFNTLGKICLSESYLCFASQDGSQCHVIIPMREVINVEKPDSGNRALTV
CVRGKRALRFSEVRDYQRLANSIRSRCGISASPQHSASSQAIRGECQSLINHFDDNPEDV
TLMVGQKDSSKAVSTEALMTVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
RKTRDLIVRGVPEALRGELWMLFSGAVNDMATHPGYYSDLVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIREHLPQLVENMTDLSFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMGALISCHDDAEAVTILNKFFDSVTNKD
SPLPSTVQQASVGSNDKTSHLNVDISELIREAYEKYGNIRSEEIESSRKRNKLHVIQTLE
DTTKQNVIRVVTQEVRFSASHLDGLYNLFKRQHFLCCYWTMKSPALLHHDPSLAYLEQYQ
LGFQQFSVLFSLLEPWAFCNVKSAVSLWVFRLIDENQDGLVNFKEFCYALDTLYSGSFTN
KLKFLFKLHLPPAFTGSPLHLKEQRIQHFIPVTEDSSHLSRLSAFDLPQDGVIKKSPERG
RGKVDLQAYLKQWQNEILKKEETIKDLPRINQTQFIQFSKTLYNIFHGDPEEESLYRAVA
HVTSLLLRMEEVGRRLQEPSSPSESTKPAAADEEEPSTEETATTPESSDTSSSRNSQDAG
TDLTEIEWSFSFEQVLASLLNEPTVVRFFERPVDVQTKLGQARVSQLKLKANQ
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaaccggacgagattctgctgaaaaatgcgtttaaactgtgggtgacggaa
gaggataacaagtacttcgtactgcaaaggagacgaggttacggagaaggcggaggcggt
ttgacaggcctccttgtgggaacgctggatactgtgttggactccacatccaaagttgct
ccctaccgcattctgcaccacacaccagactcacaagtgtattggtccatagcatgtggt
gtcaccaaagaggaaattgttcagcactgggattggctgcagcagaccatcatgaggaca
ctctctgtgtttgactccagcgaagacatcaccagctttgtacagggcaagattagaggt
cttattgctgaggaagggaagacatccctggtgctggaggaagatcccgagaagttccga
gaagcacttttgaggtttgagaagtggtttgagctgccgccaaaggaaaaactggtcaca
tattactcatgtagctactggaaaggcaaagtaccctgccagggatggctctacctcagc
actaacttcatgtgcttctattcatacctgctgggagctgaggtgaaactgatcatctcc
tgggatgaaatctggaggctggagaaaacctcgaacgttatcctgactgagagcatccat
gtcttggtccatggggaggatcactacttttccatgctgatgcacctcaatgaaacattt
gttatcatggaacagctggctgactactccatcaagcgcctttttgataaagaggccttc
cagagagagccagcgctctccgatcccctgcaaattaccaagagaggcttagaagctcat
gcaaagagtgagcagttccggacatttttcaggcttcccaaagaggaaaacctgttggag
gtgcatgagagcttcctgtgggtgcccttcagccattttaacacccttggcaagatctgt
ctgtctgagagctacctgtgtttcgccagccaagatggaagccaatgtcatgtcatcatt
ccaatgcgagaggtcatcaatgtcgagaagccagactccggcaacagggctcttacggtg
tgcgtgcgtggaaagcgagcgctgcgtttctccgaggtgcgggactaccagcggctcgcc
aactcgatccgtagcaggtgtgggattagtgccagccctcagcactctgcgtcatcacag
gccatacgaggcgagtgccagtcgctcatcaaccactttgatgacaacccagaggacgta
acgctgatggtcggacagaaagacagcagcaaggctgtcagcaccgaggctctcatgacc
gttttccacccccaggatgttgaaaaccttgaccccaaaatgcttaaagaaaagatgaag
gaacagtcgtggaacatccatttctctgaatatggacgtggcacgagtatgttcttcacc
aggaagactcgagacttgattgttcgtggcgttcccgaggccttgagaggagagctgtgg
atgcttttttcaggagctgttaacgacatggccactcatcccggctattacagtgatctg
gttgaacagtcgctgggcacaagcactttggctacagatgagatcgagagagacctgcac
cgctctctgccagagcaccccgcctttcagagcgacaccggaatctcagctctacgcaga
gtcctcactgcctatgcatacaggaaccccaaaattggctactgccaggccatgaacatt
ctcacctccgttctcctgctctacgccaaagaagaggaggctttctggctcttagtggcc
gtctgtgagaggatgttaccggattactttaaccgccggattattggcgctttggtcgac
caggcggtgtttgaggatctgattagggaacatctcccccagctggtggagaacatgaca
gacctgagtttcttctcgtccgtgtccttgtcctggttcctcactcttttcatcagtgtg
ctccccatcgagagtgccgtgaacgtggtggactgttttttctacgacggcataaaagcc
atcctgcagctcggcctggcagtgctggactacaacatgggggctctgatcagctgccac
gacgatgcagaggccgtcaccatcctcaacaaattctttgacagcgtgacaaacaaagac
agccccctgccttcaacagtgcagcaagcttcagtgggcagtaacgataaaacctcacac
ctcaacgtggatatcagcgaactgatccgagaggcctacgagaaatatggaaatatccgt
tcagaggaaatcgagagttcacggaaaagaaacaaactgcatgtgatccagacactggag
gatacaaccaaacaaaatgtgattcgggtggtgacccaagaagtcagattcagtgcctca
catcttgatgggctttataacttgttcaaaaggcagcattttctttgctgctactggaca
atgaagagtccagctctgctccatcatgaccccagcctggcctatttggagcagtaccag
ttgggtttccaacagttcagcgtgctcttctctctgctggagccctgggctttctgcaac
gtcaagagcgccgtttccctctgggtcttccgcctgatagacgagaaccaggacggcctc
gtcaactttaaagagttctgctatgccctcgatactttgtacagtggatcgttcacaaat
aagctgaagttcctcttcaagctgcacctgccaccagctttcacaggtagtcctttgcac
ttaaaggaacaaagaatccagcactttattccagtgactgaagactcttctcacttgagt
agactctctgcatttgatctaccacaagatggcgtgataaagaaaagccctgaaagaggt
agaggaaaagtggacctacaggcctacctgaaacaatggcaaaatgaaatacttaagaaa
gaagaaactattaaagacctaccccgaattaatcagactcagttcatacagttctccaag
accctgtacaacatctttcatggtgatccagaggaggagtctctgtaccgagccgtggct
catgtgaccagtcttctcctgaggatggaggaggtggggcggaggctgcaggagccgagc
agcccgtccgagtccacaaaaccggccgctgcggatgaggaggagccttcaacggaagaa
acagctacgaccccggagagctccgacacctccagctcccgcaacagtcaggatgcaggg
accgacctcaccgagatcgagtggtcgttttccttcgagcaggtccttgcttctctgctc
aacgagccgaccgtagtccgcttcttcgaaaggcccgtcgacgttcagactaaactggga
caagcgagggtttcccagctgaagctaaaggcaaatcagtga
DBGET
integrated database retrieval system
