KEGG   Cyclopterus lumpus (lumpfish): 117742473
Entry
117742473         CDS       T09199                                 
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117742473 (zc3h12b)
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     117742473 (zc3h12b)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 117742473
NCBI-ProteinID: XP_034405762
Ensembl: ENSCLMG00005019519
LinkDB
Position
14:15709765..15718002
AA seq 838 aa
MVEKLKMEKRPCREENINSSEAQHASDDSEDGSSSESEPEEQQHQRVRVNNRCKKRDPLA
VAKPHRQLCRSPCLDRPSFSQGSTAQDLREDDTAIGPAIKPASDREYQTKMEFALKLGYS
GEQVETVLNKLGAAALINDVLAELVRLGNKVEPEIQPCTATAISRPPCVKETVSPEVSVE
DDSVDMFDNLRPIVVDGSNVAMSHGNKEVFSCRGIQLAVDWFLEKGHKDITVFVPAWRKE
QSRPDALISDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSDGIIVSNDN
YRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQP
CPYGKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALAKCGTGPATVK
GDGNSEVKRVPPKRQSDPSIRSVACEPLEALSAARKSETNSVPSLVSALSVPTMQPAKSH
TAGALNTRSASSPVPGSLQFGHSSLEHMSSVQYPPILVTNSHGASITYGEQFPKYDSVSD
HGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHSVYQRNPSHCLESCLSHSNSDSFSSYGDM
YPSSVDSSLEESMKGQHQSPAQGRMQAFSHGFRHEALSRVQSYGPEEPKQGPRKQPGSHL
APHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDSNPMRQRR
PPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWNSPWEMPS
AAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAIIVTKLRSCH
NT seq 2517 nt   +upstreamnt  +downstreamnt
atggtggagaagctcaaaatggaaaaacgcccatgcagggaggagaacattaactcaagc
gaggcccaacatgccagtgatgattctgaggatggaagcagctcggaaagcgaaccagaa
gagcagcaacaccagagggttcgggtgaacaacaggtgcaagaagagggatcccttggct
gtcgcaaagccccaccgacagctctgtcgttctccatgcctcgaccggcccagtttttcc
cagggtagcactgctcaagatcttcgcgaggatgacaccgctatcggaccagcgatcaag
cctgccagtgacagagagtaccagactaagatggaatttgcattgaagttgggctattcg
ggggagcaggtggagacagtgctcaacaagctgggggctgctgcgcttattaatgatgtt
cttgctgagctggtaaggcttggaaacaaagtagagcctgaaatccaaccttgcacagca
acagcaatatcacggcccccctgtgtgaaagagactgttagcccggaggtgtcggtggaa
gacgactctgtggatatgtttgataacctcaggcccattgtcgttgatggctcaaatgtg
gcaatgagtcacgggaacaaagaggtgttctcctgtcgtggtatccagcttgctgttgac
tggtttttggagaaaggacacaaggacatcactgtgtttgtcccagcctggagaaaggaa
cagtcgaggcctgacgccctcatctcagatcaagaaatattacgcaagctggaaaaagag
aagatcctggttttcaccccatctcggagggttcaaggcaggagagtggtgtgctatgac
gatcgcttcatagtgaagctgtcttatgattctgatggaattattgtgtcaaatgacaac
tacagggacttgcaaaatgagaagccagagtggaagaagttcatagaagagcgtctcctc
atgtactcatttgtcaatgacaagtttatgccacctgatgatccccttggaagacatggt
ccaagtttagaaaatttcctccgcaagcgtcctgtggttccagagcacaaaaaacaacct
tgcccctatgggaaaaagtgcacatatggacataagtgcaagtactatcatccagagcgc
gtcaaccagccactgcggtcagtggccgatgaactacgggcgtttgccaaattgtccgca
gtgaagacgatgagtgagggggctttagctaaatgcggtactggtccggcaactgtaaag
ggggacggcaactctgaggtcaaacgtgtgccacccaaacgtcaatctgaccccagtatt
cgctcagtggcctgtgaacctcttgaggcgctgtccgccgcaaggaagtctgagacaaat
tcagtgccttcccttgtgtctgctctcagcgtgcccaccatgcagcccgccaagagtcac
acagctggggccttgaacacacgatcagccagcagcccggtgccaggctctttgcagttc
ggacacagttctctggagcacatgtccagtgtacagtaccctcctattttagttaccaat
agtcatggagcctctattacatacggtgaacagttcccaaagtatgactcagttagcgac
catggatattattcactgcacagtgatttttcaaacatgagcatgagcagcatgcataat
gtcgacagtttctgtagcatggagcacgagcatagtgtgtatcagaggaatcccagccac
tgccttgaatcctgcctcagccattcaaacagtgactccttctcctcttacggggacatg
tacccaagctccgtggacagcagcttagaggagagcatgaaggggcagcatcaatctcct
gcgcagggtaggatgcaagctttttcccatgggtttcgtcatgaagcactgagtagggta
cagagttatggacctgaggaacccaagcagggcccccgcaagcagcctggatctcatctg
gccccacatatccagcatgttgcagtgggagccaggtccagctgtcctggagactatccc
ctcactcagaatgtccttccacctttgtcctcgcagcccacacggtccctcggtatgact
cgcatggacagcatatccgattcacggctatacgatagcaacccaatgagacagaggcga
cctccactgtgccgtgagcagcatgcaagctgggaccctctgccttgtggtaatgagtcc
tatggatatcattcatatcctttgagtaacagcctgatgccgtgttgcgagcgagtgatg
gtccgcagcatgccagacaaaatggaacaaatctggaactcgccatgggagatgccatcg
gcagctgaacatcaagagcggtatgtcatcccagaccaccagtatcaaacatatcggaac
ctttgtaacatctttcctgcttacgtagtccactcggtaatggagaagaaccctcatttg
acagatccacaacagcttgccgccatcattgtcacaaaactgaggtcatgccattaa

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