Cyclopterus lumpus (lumpfish): 117742473
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Entry
117742473 CDS
T09199
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117742473 (zc3h12b)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117742473 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
117742473
NCBI-ProteinID:
XP_034405762
Ensembl:
ENSCLMG00005019519
LinkDB
All DBs
Position
14:15709765..15718002
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AA seq
838 aa
AA seq
DB search
MVEKLKMEKRPCREENINSSEAQHASDDSEDGSSSESEPEEQQHQRVRVNNRCKKRDPLA
VAKPHRQLCRSPCLDRPSFSQGSTAQDLREDDTAIGPAIKPASDREYQTKMEFALKLGYS
GEQVETVLNKLGAAALINDVLAELVRLGNKVEPEIQPCTATAISRPPCVKETVSPEVSVE
DDSVDMFDNLRPIVVDGSNVAMSHGNKEVFSCRGIQLAVDWFLEKGHKDITVFVPAWRKE
QSRPDALISDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLSYDSDGIIVSNDN
YRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQP
CPYGKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALAKCGTGPATVK
GDGNSEVKRVPPKRQSDPSIRSVACEPLEALSAARKSETNSVPSLVSALSVPTMQPAKSH
TAGALNTRSASSPVPGSLQFGHSSLEHMSSVQYPPILVTNSHGASITYGEQFPKYDSVSD
HGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHSVYQRNPSHCLESCLSHSNSDSFSSYGDM
YPSSVDSSLEESMKGQHQSPAQGRMQAFSHGFRHEALSRVQSYGPEEPKQGPRKQPGSHL
APHIQHVAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDSNPMRQRR
PPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWNSPWEMPS
AAEHQERYVIPDHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAIIVTKLRSCH
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggtggagaagctcaaaatggaaaaacgcccatgcagggaggagaacattaactcaagc
gaggcccaacatgccagtgatgattctgaggatggaagcagctcggaaagcgaaccagaa
gagcagcaacaccagagggttcgggtgaacaacaggtgcaagaagagggatcccttggct
gtcgcaaagccccaccgacagctctgtcgttctccatgcctcgaccggcccagtttttcc
cagggtagcactgctcaagatcttcgcgaggatgacaccgctatcggaccagcgatcaag
cctgccagtgacagagagtaccagactaagatggaatttgcattgaagttgggctattcg
ggggagcaggtggagacagtgctcaacaagctgggggctgctgcgcttattaatgatgtt
cttgctgagctggtaaggcttggaaacaaagtagagcctgaaatccaaccttgcacagca
acagcaatatcacggcccccctgtgtgaaagagactgttagcccggaggtgtcggtggaa
gacgactctgtggatatgtttgataacctcaggcccattgtcgttgatggctcaaatgtg
gcaatgagtcacgggaacaaagaggtgttctcctgtcgtggtatccagcttgctgttgac
tggtttttggagaaaggacacaaggacatcactgtgtttgtcccagcctggagaaaggaa
cagtcgaggcctgacgccctcatctcagatcaagaaatattacgcaagctggaaaaagag
aagatcctggttttcaccccatctcggagggttcaaggcaggagagtggtgtgctatgac
gatcgcttcatagtgaagctgtcttatgattctgatggaattattgtgtcaaatgacaac
tacagggacttgcaaaatgagaagccagagtggaagaagttcatagaagagcgtctcctc
atgtactcatttgtcaatgacaagtttatgccacctgatgatccccttggaagacatggt
ccaagtttagaaaatttcctccgcaagcgtcctgtggttccagagcacaaaaaacaacct
tgcccctatgggaaaaagtgcacatatggacataagtgcaagtactatcatccagagcgc
gtcaaccagccactgcggtcagtggccgatgaactacgggcgtttgccaaattgtccgca
gtgaagacgatgagtgagggggctttagctaaatgcggtactggtccggcaactgtaaag
ggggacggcaactctgaggtcaaacgtgtgccacccaaacgtcaatctgaccccagtatt
cgctcagtggcctgtgaacctcttgaggcgctgtccgccgcaaggaagtctgagacaaat
tcagtgccttcccttgtgtctgctctcagcgtgcccaccatgcagcccgccaagagtcac
acagctggggccttgaacacacgatcagccagcagcccggtgccaggctctttgcagttc
ggacacagttctctggagcacatgtccagtgtacagtaccctcctattttagttaccaat
agtcatggagcctctattacatacggtgaacagttcccaaagtatgactcagttagcgac
catggatattattcactgcacagtgatttttcaaacatgagcatgagcagcatgcataat
gtcgacagtttctgtagcatggagcacgagcatagtgtgtatcagaggaatcccagccac
tgccttgaatcctgcctcagccattcaaacagtgactccttctcctcttacggggacatg
tacccaagctccgtggacagcagcttagaggagagcatgaaggggcagcatcaatctcct
gcgcagggtaggatgcaagctttttcccatgggtttcgtcatgaagcactgagtagggta
cagagttatggacctgaggaacccaagcagggcccccgcaagcagcctggatctcatctg
gccccacatatccagcatgttgcagtgggagccaggtccagctgtcctggagactatccc
ctcactcagaatgtccttccacctttgtcctcgcagcccacacggtccctcggtatgact
cgcatggacagcatatccgattcacggctatacgatagcaacccaatgagacagaggcga
cctccactgtgccgtgagcagcatgcaagctgggaccctctgccttgtggtaatgagtcc
tatggatatcattcatatcctttgagtaacagcctgatgccgtgttgcgagcgagtgatg
gtccgcagcatgccagacaaaatggaacaaatctggaactcgccatgggagatgccatcg
gcagctgaacatcaagagcggtatgtcatcccagaccaccagtatcaaacatatcggaac
ctttgtaacatctttcctgcttacgtagtccactcggtaatggagaagaaccctcatttg
acagatccacaacagcttgccgccatcattgtcacaaaactgaggtcatgccattaa
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