Cyclopterus lumpus (lumpfish): 117742474
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Entry
117742474 CDS
T09199
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117742474 (brwd3)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117742474 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Bromodomain
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
WDR54
Motif
Other DBs
NCBI-GeneID:
117742474
NCBI-ProteinID:
XP_034405765
Ensembl:
ENSCLMG00005019270
LinkDB
All DBs
Position
14:complement(15626428..15640703)
Genome browser
AA seq
1831 aa
AA seq
DB search
MAGERCSRIEAELYYLIARFLQSGPCKKASQVLIEELQEYELVPQRCSWDGKKYKRTFQD
WVILNQHIPADYLLRVCQRVGPLIEKEIPPSVPGVQTLLGLGRQSLLRTTKSCSHKVCSG
SAVAALHRGRPPEPPVINGDPPSVVSILGARQATGTARFSQVLPSSSYQHMKIHKRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEICDMAVNHENTLIAS
ASCDKSIRVWCLRTCAPITVLQAHGASITSMQFCPAVKGTTRYLASTGADGMVCFWKWHS
LSMKFHDQPVKFVERSRPGVQVSTSSFSSGGMFMATGGTDHLIRVYYLGAETPVKVSEMD
AHTDKVVVVQFSNNSDSLRFVSGSRDGTARIWLYQQQEWKSVTLDIAARMPGTTVANGDD
KTKLVVTMVAWDRADSTVITAVSNYLLKVWSTTTGHLLHVLSGHDDEVFVLEAHPFDSRI
MLSAGHDGNIYMWDLTKGAKIRNFFNMIEGQGHSAIFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDIDGNPHPTH
YQRLVPGRENCKEDQLVPQLGYMANSDGELVEQVLGQQTAENRESLLDDLIRQLQNEQDE
RQIVEEPAPDVEALDEAELEASSPAAETHRSGQVGGLWQMQHNALRSQVATERDLLAWSH
RVMVNEVPRGISRVVEQCRRAKGDMECSLYNAERRKKPVACTPKSDLLTSRLRSLRSLRP
TKKKQQRHAYETRSAQVRRAGNRSRNSSTRRNSDSQVDSDSDGNTAAQAEQSAASSDDEA
QWQSESSSSDSSSEYSDWTADAGINLQPPKRPTRRPAQPKGYSSSEEEEEEGDGKAKEAK
KRDNEKRKKPKETKQKPTASLAGLDAEEWLPPSWIIETIPHRSPFVPQMGDELIYFKQGH
QAYVRAVRRAKAYSINPQKQPWNRLDLRDQESVKVVGIKYEVGPPTLCCLKLAFLDPVSG
KMTNESFSLKYHDMPDVIDFLVLQQFYNEAKEHNWQPGLRFRSIIDDAWWFGSVEDQEPL
QPEYPDSLFQCYAVKWDNGEREKMSPWDMEPIPEEAALPEQVGDGVDVAEEELKALLYTP
QEGEWGAHTRDEDCERVLHGIDQLLTLDVAKAFASPVNLRDYPLYCTAVAYLTDLGTVRK
RLENRFYRRISALMWEVRYIEHNARTFNEPQSPIVATAKVVTDVLLHYIGDQSCTDILDL
YHKLKSEISSGEEAEAELDVDSDTPGTSAGHWGADPDSKKRGLVLDVKFWHGQCKELVRR
MIVSPDSEPFRQSVDLFAYPDYRNIIDTPMDLASVSETLMAGNYESPMEFAKDVRLIFSN
SKAYTPNKKSQIYTMTLSLSAFFEKNIISIISDHKSAVQNERRTLQRLSYRNRMHNGGNS
PPNSPSPSPKGKQKSGKVSKPKKSQPSTKNRSRRSHKAQQSSSVAEEEDIQPSSPSSGMS
SESGKQGPHRVTRSQATPVKKSRRQRNLHLSNGSRQRRGREAPPSDHEDNEEEDEEEDDE
EDDEEEEKVQEKVDEKEAVSGSGSGSNSSSSDSSSTSSSSSSSSSSDSDNSSESEMEKYV
EGGDHDYSKAPYLSVSHSARGKVAASGKRRHKGGEDTAQRPKRARVQLPVEEEEEEEEEE
EEEEEEEEEQEQQQQEEEEEEEEEEEEQQLVDVGHDEDEGELEEDEEGEGDEEDEEEEEP
EEEEPEEEDNTDGMQTGVAAATAASSLRGHCKSRRVNTRNQGRRTVLYRDESEDDGHGSK
EDPLNLGMSRSGRVRRMTEKARVSHLMGWSH
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaacggtgttcacgaatcgaagctgaactgtattacctcatcgccaggttt
ctacagtccggaccctgtaagaaggcatcgcaggttctgattgaggagctgcaggagtat
gagttggtccctcaacgatgtagttgggacgggaagaaatacaaacggaccttccaagac
tgggtgattttgaaccagcacattcctgcagactatctgctccgtgtttgtcagcgtgta
ggcccgcttatagagaaggagatcccaccgagtgttcctggagtccaaacacttctgggg
ctggggagacagtccttgcttcgtactaccaaaagttgtagccataaagtatgcagtggc
tcagctgttgctgcacttcaccgaggccgcccaccagaacctccagtcatcaatggagat
cctcccagtgttgtgtccatcttgggtgctcgccaggctacaggcacagctcggttcagc
caggtcctgccgtcttcctcctaccaacatatgaagatacacaaacgtatccttggccac
ctttcttcagtctactgtgtagcctttgaccgcaccggccgtaggatatttacgggttct
gatgactgcctggtgaaaatctgggccacagatgacggccgtctcctggcaacactccgc
ggccactcagcggagatctgtgacatggccgtcaaccacgagaacaccctcattgcctct
gcaagctgcgacaaatccatcagagtgtggtgcctgcgtacctgtgcacccatcactgtt
ctgcaggcccacggggcctccatcacatccatgcagttttgtcctgccgtcaaagggaca
acgaggtacctggcctccacgggggcagacggcatggtgtgtttctggaagtggcactcg
ctcagcatgaaattccatgatcaacccgtcaagtttgttgagcgatcgcgtccaggagtt
caagtctccacttcctcctttagcagtgggggtatgttcatggccacgggtggcactgac
catttgatcagagtctactaccttggtgctgagactcctgtgaaggtctctgagatggat
gcgcacacggataaagttgttgtcgtccagtttagcaataacagcgacagcctaaggttt
gtgagcggcagtcgcgacggcacagccaggatctggctttaccagcaacaggagtggaag
agcgtcactttagacattgctgccaggatgcctggaactactgtcgccaatggggacgat
aaaaccaagctggtggtgaccatggtggcctgggaccgtgcagacagcaccgtcatcacg
gcagtgtctaactacctgctcaaagtgtggagcacaaccactggacatctgctgcatgtt
ttatctggtcacgatgacgaggtgtttgtgctggaggctcacccatttgactcccgtatc
atgctgtctgccggccacgatggcaacatttacatgtgggacctgaccaaaggagcgaag
atccgcaacttcttcaacatgattgaagggcaaggccacagtgctatctttgactgcaag
ttctccgctgatgggcagcattttgcctgcacggactctcacggccatttgctcatcttt
ggcttcggctgcagcagaccatacgagaagattcctgaccagatgttcttccacacggac
taccggcctctcattcgtgactctaataactacgtgctggacgagcagacgcagcaagcc
ccacacctcatgcctccacccttcctcgtggatattgatggaaatcctcaccctactcac
taccagcgcctggtgccaggaagagagaactgcaaggaggatcagctggtaccccagctc
ggatacatggctaacagtgatggagagttggttgagcaggtacttggccagcaaacggca
gaaaacagagaaagcctgttggacgacctcatcagacagttgcagaatgagcaggacgag
cgtcagatcgtagaggagccggctccagacgtagaggcgcttgatgaagcagagttggaa
gcctcctctccggctgctgaaacacacagaagtgggcaggtgggcgggttgtggcagatg
cagcataatgccctgcggagtcaagtggccacggagagggacctgctggcctggagccac
agggtgatggtcaatgaagtgcctcgtggcatatccagagttgtggagcagtgcagacga
gccaaaggcgacatggaatgttctctatacaatgctgagaggaggaagaaacccgtagcc
tgcacacccaagagcgatctgctgacttctcgcctgcgctcactgcgctccctgcggcca
accaagaaaaagcagcagcgccacgcctacgagacccgctcagctcaagtccgtcgtgct
gggaacaggagtcgaaattccagcacccgacgtaactctgacagccaggtggactctgac
agtgatggcaatacagcagcgcaggcggagcaaagcgcagcctcctctgatgatgaagct
cagtggcagagcgagagcagctccagcgactcctccagtgaatattctgattggactgcc
gacgctgggatcaacctccagccaccgaagagaccaaccaggaggcctgctcagcccaaa
ggttacagcagctctgaggaggaggaggaagaaggcgatggcaaggcaaaggaggccaag
aagagggacaatgagaagaggaagaagcctaaggagaccaaacagaaaccaacagcctct
ctggctggactcgatgcggaggagtggcttccaccgtcatggataatagagaccatccca
caccgctctccctttgttcctcaaatgggagatgagctcatctacttcaaacaaggccat
caggcctacgtgcgggccgtgcgcagggccaaggcctacagcattaaccctcagaaacag
ccgtggaacagactcgacctcagggaccaggaatcggtgaaggtggttggaattaaatat
gaagtgggacctcccaccctctgctgcctcaaactggctttcttggacccggtctcaggg
aagatgaccaatgagtctttctcattaaagtaccatgacatgcctgatgtcatagatttt
ctggtactgcagcagttttacaacgaggctaaagagcacaactggcagccaggcctgagg
ttccgcagcatcatcgatgacgcctggtggttcggctccgtggaggaccaggagcctctg
cagccagagtacccagacagcctgtttcagtgctatgcagtaaagtgggataatggagag
cgggagaaaatgagtccctgggacatggagcctattcctgaggaagctgcgttgcctgaa
caggtaggtgatggcgtggatgtggctgaggaggagctaaaggctctgctctacacgcct
caggagggagaatggggagctcacacacgagatgaagactgtgagcgagtcctccatggc
atcgatcagcttcttacactggatgtagcaaaggcattcgcgtcaccagtgaacctgcgg
gactaccctctgtactgcacggcggtggcttatctcactgacctcggcaccgtccgcaaa
cgactggagaaccgcttctacaggcggatctctgcattaatgtgggaggtgcgctacatc
gagcacaacgcccgcaccttcaacgaaccccagagccccattgtagcaacggccaaagtg
gtgactgatgttctcctgcactacatcggcgaccagagctgcacagacatcttggatctg
tatcacaaactgaagtctgagatcagcagtggagaagaagctgaggctgagttggatgtg
gactctgacaccccgggcacatctgcaggacattggggagccgacccggattccaagaag
cgtggtctggttttggatgtgaagttctggcacggtcaatgcaaagagctggtgcgccga
atgattgtctcgccagattccgagccgttcaggcagtcggtggacctctttgcgtatccg
gactatagaaacatcatcgacactcccatggatctggcttcagtgtcagaaacgctgatg
gcaggaaattatgaaagcccgatggagtttgccaaagacgtgcgcctcattttcagcaac
tccaaagcatacacgccgaacaagaaatcacagatctacactatgaccctcagcttgtcg
gccttctttgaaaaaaacatcatctccatcatctcagaccacaagtccgccgttcagaat
gaacggcggactctccagagactcagttacagaaacagaatgcacaacggtggcaactcc
ccgcctaatagtccatcccccagccctaaagggaagcaaaagtcagggaaggtgtcgaag
cccaaaaaatcccagccctcaacaaagaatcgttctcggagatcacataaggctcagcaa
agcagcagtgtagcagaggaggaagacatccagccttcttccccaagttcagggatgagc
agcgagagcggaaagcaagggccgcaccgggtgacccgcagccaagcaactcccgtgaag
aagtcaaggcgccagcgtaacctgcatctaagtaacggctccagacagcgccgcgggcga
gaggcgccgccgtctgaccacgaggataacgaggaggaggacgaggaggaagacgacgag
gaggacgacgaggaggaggagaaggtgcaggagaaggtggatgagaaggaggcggtgtcg
ggttcgggatcgggatccaacagctcctcatcggactcatcctccacctcatcgtcctcc
tcttcctcgtcatcgtcggacagcgacaacagctctgagtccgagatggagaagtatgtg
gaaggaggagatcacgactacagcaaagcgccctacctgtcagtaagccactcggctagg
ggtaaggtggcggcctcagggaaaaggagacacaaaggaggagaggacacggcacagaga
cctaaaagagcacgagtgcagctgccggtggaggaggaggaggaggaggaggaggaagaa
gaagaagaagaagaagaggaggaggagcaggagcagcaacagcaggaggaggaggaggag
gaggaagaggaagaggaagagcagcaactggtagatgtaggacatgacgaagatgaggga
gagctggaagaggacgaggagggggagggggacgaagaggacgaggaggaggaggaacct
gaggaggaggaacccgaggaagaggacaacactgatggaatgcagacaggagttgccgcg
gcgacagcagctagcagtctaagaggccattgcaagtctcggcgggtcaacacgcgcaac
cagggccgcaggacagttctgtacagggacgagtcggaggacgatggccatgggtcgaag
gaggaccccctcaacctgggcatgtcccgctcaggacgggtacgccgcatgacagagaaa
gcccgtgtcagccacctcatgggctggagtcactga
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integrated database retrieval system
