Cyclopterus lumpus (lumpfish): 117742480
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Entry
117742480 CDS
T09199
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117742480 (siah2l)
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117742480 (siah2l)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117742480 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117742480
NCBI-ProteinID:
XP_034405782
Ensembl:
ENSCLMG00005010045
UniProt:
A0A8C2XMK2
LinkDB
All DBs
Position
14:complement(784893..799377)
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AA seq
319 aa
AA seq
DB search
MSRPSSAGAGAGGGGGLGAGKAGGGKHGGAGGAAAAAACAAAAGGGGVSSGSAAPPVSLA
AVGLPGQSPELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIR
NLAMEKVASTLPFPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPGATCKWHGALDA
VMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFSHHFMLVLEKQEKYEGHQ
QFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSI
AHLFADNGNLGINVTISMC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgtcctcagccggagccggagccggaggaggaggaggactcggagccggt
aaagcaggcggaggaaagcacgggggagccggaggagccgccgccgccgctgcgtgtgcg
gcggcggccggaggcggcggagtgagctccgggtccgccgcccctcccgtgtccctggcc
gcggtcggcctgcccggccagtccccggagctcacggcgctcttcgagtgcccggtgtgc
ttcgactacgtgctgccgcccatcctgcagtgccaggccggccacctggtctgcaaccag
tgccgccagaagctgagctgctgcccgacctgccgaggcccgctgaccccgagcatccgg
aacctggccatggagaaggtggcgtccacgctgccgttcccctgcaagtactcgtcggcc
ggctgcctgctgtccctccaccacagtgagaagccggagcacgaggaggtgtgtgagttc
cggccgtacacctgtccgtgtcctggagccacctgcaagtggcacggagccctggacgcc
gtcatgcctcacctgatgcacgcccacaagtccatcaccacgctgcagggcgaggacatc
gtcttcctggcgacggacatcaacctgccgggcgccgtggactgggtgatgatgcagtcg
tgcttcagccaccacttcatgctggtcctggagaagcaggagaagtacgaaggccaccag
cagttcttcgccgtcgtgctgctcatcggcacccgcaagcaggcggagaacttcgcgtac
cgcctggagctcaacggcaaccggcgccgcctcacctgggaggccacgccccgctccatc
cacgacggggtggcggccgccatcatgaacagcgactgcctggtgttcgacacctccatc
gcccacctgttcgccgacaacggcaacctggggatcaacgtcaccatctccatgtgctga
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integrated database retrieval system
