Cyclopterus lumpus (lumpfish): 117742515
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Entry
117742515 CDS
T09199
Symbol
gria3a
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor 3a
KO
K05199
glutamate receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117742515 (gria3a)
04082 Neuroactive ligand signaling
117742515 (gria3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742515 (gria3a)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Glutamate (ionotropic)
117742515 (gria3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
117742515
NCBI-ProteinID:
XP_034405852
Ensembl:
ENSCLMG00005002756
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All DBs
Position
14:15203172..15260540
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AA seq
886 aa
AA seq
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MWHRTIAAVLVLLYLWGDSLAGFPNQINIGGLFMRSTVQEHSAFRFAVQLYNTNQNATEK
PFHLNYNVDNLESSNSFSVTHAFCSQFSRGVYAILGFYDRKSMNTLTSFCGALHTSFITP
SFPIDADVQFVIQMRPGLRGAVLSLLGHYKWEKFVYLYDTDRGFAILQAIMESAVANNWQ
VTARSVGNIVDPTEYRRIIEEMDRRQEKRFLIDCEVGRINAILEQVVTSGKNSRGYHYIL
ANLGFSNISLDRVFSGGANITGFQIINPDXPIVQQFLQRWERLDEREFPEAKNTPLKYTS
ALTHDAILVIVEAFRYLRRQRVDVSRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMT
GNIQFDTFGRRSNYTIDVYEMKTGGPKKIGYWNEYEKFVYIMDQQVTNESSSVENRTIVV
TTIMEAPYVMYKKNYMQMDGNDRYEGYCVDLASEIAKHVGIRYKLSVVPDGKYGARDPET
KTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF
LDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDESDEAKDPQSPPDPPNDFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIEGA
EDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVARVRKS
KGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMTVALIEFCY
KSRQETKRLKLAKNAQNFKPAPPANTQNFATYREGYNVYGTESVKI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatcgcaccatagcggcagtcctggttttattgtatctttggggggactcgctg
gcagggtttccgaaccagatcaacattggcggactgttcatgcgctccacggtgcaggag
cacagcgccttcaggtttgctgtccagctgtataacaccaaccagaatgcgacggagaaa
cctttccacctcaactacaatgtggacaacctggagtcctccaacagcttctcggtcaca
cacgccttctgctcccagttctcccgaggagtctacgccatcctcggcttctacgacagg
aagtccatgaacacgctgacctccttctgcggggcgctgcacacctccttcattactccc
agcttccccattgatgctgacgtgcagtttgtcatccagatgaggcccggtttgcgagga
gctgtcctcagtctgctgggccattacaagtgggagaagtttgtctatctttacgatact
gacagaggttttgccatcctccaggccatcatggagtcggccgtagccaataactggcag
gtgacagctcgctcggtgggaaacatcgtagaccccacagagtacagacgcatcatcgag
gagatggaccggcggcaagagaaacgttttctcattgactgtgaggtgggcaggatcaac
gccatactggagcaggtggtgacctcaggaaaaaacagcagaggataccattatatcctt
gccaacctgggtttttccaacatcagcctggacagggtcttttctggtggagccaacatc
acaggcttccagatcatcaacccagacnagcccatcgtccagcagttcctccagcgctgg
gagcgcctagatgaaagagaatttccagaagccaaaaacactccactgaagtacacgtca
gcgctgacccacgatgccatcctcgtgattgtggaggccttccggtacctgcggcgccag
cgagtggacgtgtctcgcagggggagtgcgggagactgcctcgccaaccctgctgtgccc
tggagccaaggcatcgacatagagagagccctcaaaatggtccaagtacaaggtatgaca
ggaaacattcagttcgacacatttggtcgacggtctaattacacaattgatgtgtacgag
atgaaaaccggaggccccaagaagatcggctactggaatgagtacgaaaagtttgtttat
attatggatcagcaggtcaccaacgagtcctcttctgtggaaaaccgaacaattgtggtc
actactattatggaagctccgtatgtgatgtacaagaaaaactatatgcagatggatggg
aatgacagatatgaaggctactgtgtcgatttagcttctgaaattgcaaaacatgtgggg
ataagatataagctgtcagtagtcccggatgggaagtacggagccagagatccagagacc
aagacgtggaacgggatggtgggtgaactggtttatgggagagctgacatagccgtggct
cctctaactataacgttggtacgggaagaagtgatagatttctctaagccctttatgagc
ttgggcatctccattatgattaagaagcctcaaaagtccaagcctggggtgttttccttc
ctggacccactggcctatgagatttggatgtgtatagtttttgcctatatcggcgtgagt
gtggtgctcttcctggtgagccgtttcagcccttacgagtggcatctggacgaaagtgat
gaggccaaagaccctcagagccccccagaccctccaaacgactttgggatttttaatagc
ctgtggttctccctgggtgccttcatgcagcaaggatgcgatatctcaccaagatctttg
tccggccgcatcgtcggaggagtgtggtggttcttcaccctcatcatcatctcctcctac
acggctaacctggcggcctttctcaccgtggagaggatggtttctccaattgagggtgct
gaggacctggccaagcagacagagatcgcctacgggacgttagactcaggctccactaag
gagttctttaggcgctccaaaatagcagtttatgagaaaatgtggtcatacatgaaatca
gctgaaccgtcagtgtttgccaaaacaacaccagacggggttgccagggtacgaaagtcg
aagggcaagttcgcctttctactcgaatccacaatgaacgagtacatagagcagcggaaa
ccatgtgacaccatgaaagtgggcggcaacctcgactctaagggctatggtgtggccaca
cctaaaggctcagcattaggaaatgctgttaacctggcagtgttaaaactgaatgagcaa
ggcctcttggacaaattgaaaaacaaatggtggtacgacaagggagagtgcggcagcggg
ggaggtgactctaaggacaagacaagtgcactgagcctgagcaatgtggcaggagtcttc
tatattctggtcggagggcttggcctggctatgaccgtggctttgatagagttttgctat
aagtcacggcaagaaaccaaaagactgaagctggcaaagaatgctcaaaactttaagcca
gcccctccggcaaacacccagaattttgccacgtatcgtgaaggctacaacgtgtacggg
accgagagtgttaagatctaa
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