Cyclopterus lumpus (lumpfish): 117742527
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Entry
117742527 CDS
T09199
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117742527
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117742527
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117742527
NCBI-ProteinID:
XP_034405872
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Position
14:21648137..21671751
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AA seq
916 aa
AA seq
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MKGGGRGKEPPVAGEVTGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELEKQPVLCGQ
DQESHVQCASTTGEVEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLEPKEKQKYTDMAKEPLVMSRCTLPDMLGGSSFMEILRTGSPFLKRDFSVHGSRLT
FPQYKDAFMKANPGYKWCPTTSKPVKSPSGQPVSNPRKKVWSFSSNSTKDSSTAKKVPKT
DSMPQLNFAMADPTKMGGLSMLLLAGEHALTNREIPSTTKPSLPDTASEGNSFPGDEEEM
LSGTIPNRVPDLTETRVKCASSTLAESSLSAAPEGKPCRQSALFQLAEMCLASEAGKMDS
AVSRQPEDSSSTASLQQTTIKPEIKEETQDREDCPSSAPSPSLSSVTSTSTHAIPPQLCS
QNARVKNKSKKKEVAKSNNTDETPCQAKKIFKKCNPAVSSVDSVFSTIEAVAKGAWKDTE
EKPKKKIQGSPTGGNSGVPKKKSKPKVKALVQDKEEEMEEDSGQCGQHSASEVEMTEEAS
DVSPKTQADEAGIGSTDLQGSMAEPHLSPCSPSPAKLKEEDKGKERSSEGTCDSNTESHG
SRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGALRASDHDANWSDDSWTVSQIGPNN
PKKLKKSKSKEECSQGLGKLEEEFERKFNSLPQYSPMTFDKKGAAVTKKKKPDSAVVQED
VSKAGKGPSPSQKKTSFHKIVRKHKHKKERPGAVDKAAAQSDSTTLDSASRAKPCAPVAI
MCPDIQGAASMEMLVGSQKRKARKTKITHLVRTADGSVSPVEEDKTRDLNQEEDKKPLPQ
QNLCNEKGCHSNPGAEEEEEEAERSAAPQELPAFFSLAALAEVAAMENVHRGQRGLAENQ
TKELAQTPVLISCADQ
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaggaaggggcaaggagccacctgttgcaggggaggtcactggcaagcgt
cccaaacgcaagtgcctgcagtggcatccacttctctccaaaaaggctctggatttctct
gaggaggaggaagaggaggatgaagaggagctggagaagcagccagtgctgtgtggccag
gaccaggagtcacatgtgcagtgtgcaagcacaacaggggaagtggaggaggactcgagt
gaacagcgggcacggcggccgatgaatgccttcctcctcttctgcaaacgccaccgctcc
ctggtgcggcaggaacatccacgcttggataaccgcggggccaccaagatcctggctgac
tggtgggctgtgctggagcccaaagagaagcagaaatacactgacatggccaaggagcct
ctcgtcatgagtagatgcacgcttcctgatatgcttggtgggagcagtttcatggaaatc
ttgagaaccggatcaccatttctgaaaagagactttagtgttcacggctccagactaact
tttccacagtacaaggatgcatttatgaaggcaaacccgggctataagtggtgtcccacc
accagcaaaccagttaagagcccttccggtcagccagtcagcaacccccgcaaaaaagtt
tggtccttctcttccaactcaactaaggactcctccactgccaaaaaagtgcccaaaact
gacagcatgccacagttaaactttgccatggcagatcctacaaagatgggaggccttagc
atgctgctgttagctggggaacatgcccttacaaacagagagatcccttccaccactaaa
cctagtttacctgacacagccagcgaagggaactcctttccaggggatgaggaagagatg
ttgtctgggacaataccgaacagagtgcctgaccttactgagaccagggtgaagtgtgcc
tcttccacactggccgagtcatctctctctgcggcacctgaaggaaaaccctgcagacag
tctgctctcttccagcttgctgagatgtgcttagcgtctgaagctggaaagatggactcc
gcagtgtctcggcagcctgaggacagctcctctacagcctctctccagcaaaccacaatc
aagccagagatcaaggaggagacacaagacagagaggactgtccctcatcggccccctca
ccttcgctctcctctgtcacttctacctccactcatgccatccccccacaactctgcagc
caaaacgcacgtgtcaaaaacaagagcaagaaaaaagaggtggctaagtccaacaatacc
gatgagaccccatgccaggcaaagaagatcttcaagaagtgtaacccggcggtgtcaagc
gtggacagtgtcttcagtacgatcgaggcagtggccaaaggggcctggaaggacacggag
gagaagcccaagaagaagatccagggcagtcctactggtgggaactcaggtgtgcccaaa
aagaaaagtaagcccaaagtcaaggccttagtccaagacaaagaggaggagatggaagag
gacagcgggcagtgtgggcagcacagtgcctctgaggtggaaatgacagaagaggcgagt
gatgtcagtcccaagacacaggcagacgaagcgggtataggaagcacagacctgcagggc
agcatggcagagccccacctgtccccctgcagcccctcccctgctaagctcaaagaggaa
gacaagggaaaggagaggtcgagtgaaggaacctgtgactccaacacagagagccatggc
tcccggaagtcagagcggagctgtaaaggcgccctgtacaaaaccctggtttctgaggga
atgctgacctcactgagagccaacatcgaccgaggtaaaagaggtgctctccgtgcctcc
gatcatgatgcaaactggagtgatgacagctggacagtttctcagataggacctaataac
cccaagaagctgaagaagtccaagtccaaagaagaatgttcacaaggcctagggaaactg
gaggaggagtttgaaaggaagtttaacagtctgccacagtacagcccaatgacgtttgat
aagaagggggccgctgtcacaaagaagaagaagcccgacagcgccgtcgtccaagaggac
gtctctaaagccgggaaagggccatctccatctcagaaaaagacttcattccacaagatt
gttaggaagcacaaacacaaaaaggagagaccaggtgcagtggacaaagcggcggcacag
agtgactccacgacgctggattcagcttcaagagccaaaccgtgtgcccccgttgccata
atgtgcccagacatccagggcgccgctagtatggagatgctagttggtagccagaagagg
aaggccaggaagaccaagatcacacacttggtgcgcacagctgacggcagtgtgtctccg
gtcgaggaggacaaaactagggacctgaaccaggaagaggataagaagccattaccacaa
cagaatttatgcaatgaaaaagggtgccacagtaatcccggagcagaggaggaagaggag
gaggcagagaggagcgctgcaccacaagagctacctgctttcttcagcctggcagccctc
gctgaggtagcagccatggagaatgttcacagaggccagagaggcttggctgagaatcag
acgaaggagctggcccagactccagtcctcatctcctgcgctgatcagtga
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