Cyclopterus lumpus (lumpfish): 117742553
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Entry
117742553 CDS
T09199
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117742553 (gabra6b)
04082 Neuroactive ligand signaling
117742553 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742553 (gabra6b)
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117742553 (gabra6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
117742553
NCBI-ProteinID:
XP_034405939
Ensembl:
ENSCLMG00005017312
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All DBs
Position
14:7706157..7732765
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AA seq
475 aa
AA seq
DB search
MLILKVDQGFLVVGCLRGMAFLLTCLFLSCYSVSSVWGNKPGENIYLDNITRILDRLLDG
YDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILR
LNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMN
FPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPEESSSLLQYDLIGQTVSSERLKS
NTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLT
MTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAM
KAAAQEAAAAAASPAAAAGNDGEVSSVDASSVLKKRMNSAPVFDRPAKTFPNPPVNAQAF
LQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgaccagggatttttagttgtggggtgcttgcgaggcatggct
ttccttttaacttgcttatttctgtcttgttacagtgtgagcagtgtttggggaaataag
cccggcgaaaatatctatttggataacatcacgcgcatattggatagattactggacggc
tatgacaacaggctgcgacctggatttggaggtccagtgacagaggtcaaaactgacatc
tttgtcaccagctttggacccgtttcagatgttgagatggaatacaccatggacgtcttc
ttccgtcagacgtggattgacgagcggctgaaatttgagggccccatcgagatcctgcgg
ctcaacaacctgatggtcagcaagatctggacgccggacacctttttccggaatggcaag
aggtcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaacgga
actatcctctacaccatgagattaactataaatgcagagtgtcccatgcgtctgatgaac
ttcccgatggacggccacgcctgcccgctcaaatttgggagctatgcttaccccatcagc
gagatcgtgtacacgtggaagaaaggtcctctgtcctctgtggaggtgccagaggaatcg
tctagtttgctgcagtacgacctcatcggtcagacggtgtcaagcgagaggctgaagtcc
aacacaggtgaatatgtcatcatgacagtccatttccacctgcaaaggaagatgggcttc
ttcctgatccagacatatattccctgtattatgaccgtcatcctggcccaagtctctttc
tggattaataaagaatcagttccagcgaggacggtgtttggtatcaccacggtcctgacc
atgacaacactcagtatcagcgcccgccactccctccccaaagtttcttacgccacggcc
atggattggttcatcgccgtttgctttgctttcgttttctccgccctgattgagtttgcg
gccgtcaactacttctccaccctgcaggccaacagggagctgaggaaagcagcagccatg
aaggcggcggctcaggaggcggcagctgcagctgcctcaccggctgcagccgcggggaac
gacggagaggtttcctctgtggatgccagcagtgtgctgaagaagaggatgaactctgcc
ccagtgtttgaccgccctgccaaaacatttcccaatccacccgtcaatgcccaagccttc
ctgcagcagggttcagcggtgccagccaacaacgttctgacgggcaccagcatcatcgac
aaatactcccgcatcctctttccactttcgtttggcgccttcaatctggtctactggatc
gtttatctcactaaggacacgatggagatgtccagggataccgtgtaa
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