Cyclopterus lumpus (lumpfish): 117742566
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Entry
117742566 CDS
T09199
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117742566 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117742566 (cadm1a)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
Nectin family
117742566 (cadm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
C1-set
Motif
Other DBs
NCBI-GeneID:
117742566
NCBI-ProteinID:
XP_034405957
Ensembl:
ENSCLMG00005002511
LinkDB
All DBs
Position
14:4608618..4939081
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AA seq
440 aa
AA seq
DB search
MAITGSGSLATILFLFMFQAALLKGAAQEPVVSQNLVTDNVSVVEGEMAIISCRVKDNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIEGRDEVLSEGNETEMTCTAMSSKPAATIRWMKGDKELPGKPM
VELTYDKMYTVTSRLTFTVSKEDDGVPVSCIVDHPAVKDFQAQKYLEVQYKPEVKILVEF
PPGLTREGENLELTCHAKGKPQPQRVNWVKVDDDVPSHAVITGGDLYIENLNKSYNGTYR
CVASNTVGESFDDYILYVYDAPSTTPIPTTATTTTITTTISYPEANQDTGPSTEPAAHDS
RAGEGAPRTVDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADT
AIINAEGGHTNSDEKKEYYI
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcactggcagcggttctctcgcgactattctctttttattcatgtttcaagcg
gctcttctcaaaggagctgcacaagaaccagtggtgagtcagaacctggtgacagacaat
gtgtcggtggtggagggcgagatggccatcatcagctgtcgggtgaaggacaacgacgac
tccgtcatccagctgctgaaccccaacagacagacgatttacttcagagacgtgagacca
ctgaaagacgctcgctttcagctggtgaacttctcagacaacgagctgcgggtgtcgctg
tctaacgtctcgctgtcggacgagggtcgatatgtctgccagctctacacggaccccccg
caggaagcctacgccgacatcaccgtgctgattcctccaggtaaccccatcatcgagggc
cgggatgaggtcctgagcgagggcaacgagacagagatgacctgcactgccatgagcagt
aagcctgctgccaccatcagatggatgaagggagataaagagcttccaggcaagcccatg
gtggagctgacctacgacaagatgtacacagtaaccagccggctgacgttcactgtgagc
aaggaggatgatggtgtgccagtgtcttgcatcgtagaccaccctgcagtcaaggacttc
caagcacaaaaatacctggaggtgcagtacaaaccagaggtaaagatcctggtagaattt
cctccgggtctcaccagggaaggagagaatctggagctgacatgccatgccaaaggcaaa
ccccagccacagcgggtgaactgggtgaaggtggatgatgatgtgccgtcccatgccgtc
atcaccggcggggacctttacatcgaaaacctaaacaagtcctacaacggaacctaccgc
tgtgtggcttccaacacagtgggggagtccttcgacgactacatcctctacgtctatgat
gctccctccactacccctatacccaccacagccacaaccaccaccatcaccactaccatc
tcctaccccgaagccaatcaagacactgggcccagcactgaacctgcagctcatgattcc
cgagctggagaaggagcacccagaacggtggaccacgcagtgatcggaggagtggtggcc
gtggtcgtcttcgccatgctctgtctactcatcgtcttggggcgctacttcgcgagacac
aaaggtacctacttcacacacgaagccaaaggagccgatgacgcagcggacgccgacacg
gccatcatcaacgcggagggcggccacaccaactcggacgaaaagaaagagtactacatc
taa
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