Cyclopterus lumpus (lumpfish): 117742582
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Entry
117742582 CDS
T09199
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117742582
04082 Neuroactive ligand signaling
117742582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742582
Ion channels [BR:
clum04040
]
Ligand-gated channels
GABA-A
117742582
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117742582
NCBI-ProteinID:
XP_034405988
Ensembl:
ENSCLMG00005017276
LinkDB
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Position
14:complement(7644320..7695230)
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AA seq
525 aa
AA seq
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MAVFRIRRMRCFCVWFFPLVVTVVCAQSAGANDPSNMSLVKETVDRLLKGYDIRLRPDFG
GAPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLW
VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL
EIESYGYTTDDIEFHWRGGNNAVTGVDKIELPQFSIVDHNLISKNVVFSTGAYPRLSLSF
KLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL
PKIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQRQKRAAEKLTLANNEKMRMD
PNKWLVGNVVGRDDTLYARMKQRDLDGHDSLWEPIFVDDGAIGLGEQKNKMDTHENILLG
TLDIKNDMGVSELALGLNDPRNTMLTYDSSTLQYRKAGLARHNFGRNTLECHMTQKKSRL
RRRASQLKINIPDLTDVNSIDKWSRVIFPTVFSFFNIVYWLYYVN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttcagaataagaagaatgaggtgtttttgcgtctggttcttccctctcgta
gtgacggtggtgtgcgcccaaagtgccggtgccaatgaccctagcaatatgtcgttggtt
aaagaaacggtggatagactgttgaaaggttatgatatacgattgaggccagatttcgga
ggtgctccggttggagtgggaatgaacatagacatagccagcatagacatggtatcagaa
gtcaatatggactacacactgacgatgtactttcagcaggcctggcgagacaaacggctg
tcctactctgagatccccctcaatctgaccttagataaccgggtggctgaccagctctgg
gtccccgacacctacttcctcaatgacaagaaatcgtttgtccacggtgtcacggtgaaa
aatagaatgatccgactgcacccggacggcaccgtactgtacggtctaaggatcactacc
accgctgcttgtatgatggacctgagaaggtatccactggacgagcaaaactgcacactc
gagatagagagttatggctacactaccgacgacattgagttccactggcgaggaggaaac
aatgctgtgacgggggtggacaagatcgaactgcctcagttttccatcgtggatcataat
ctcatctccaagaatgtcgtcttctccacaggtgcttaccctcgtctgtcccttagtttc
aaactgaagagaaacatcgggtacttcatcctgcagacatacatgccttctatacttatc
acaatcctctcatgggtctccttctggatcaactatgacgcctctgctgccagagtggct
ctggggatcaccacggtgctgaccatgactaccattaacacccacctgagagaaaccctt
cccaaaatcccctacgtcaaagccatagacatgtacctcatgggctgctttgtctttgtc
ttcctggctctgctggagtacgcgctggtaaactacatattctttggacggggccctcaa
cgtcagaaaagggcggctgagaaactaaccctagctaacaatgaaaagatgaggatggat
ccaaacaagtggctggtggggaatgtagttggcagagatgacactctgtatgcaagaatg
aaacaaagggaccttgacggccatgactcgttgtgggaaccaatctttgtagacgacgga
gcgatcggactcggcgaacaaaagaacaagatggacacacatgaaaacatccttttgggc
accttggacatcaagaacgacatgggcgtctcagagctggctctgggtctcaacgacccg
cgaaataccatgctgacatacgacagctcgactctgcagtaccgcaaagcagggctggcc
cggcacaactttggtcggaacacgctggagtgccacatgactcaaaagaagagccgacta
cggaggcgcgcttcacagttaaagatcaacatcccagacttgactgatgtaaactctatt
gacaagtggtcgagggttatcttcccgactgtcttctccttctttaacattgtttactgg
ctttactatgtcaattaa
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