Cyclopterus lumpus (lumpfish): 117742585
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Entry
117742585 CDS
T09199
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117742585 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117742585 (pds5b)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117742585 (pds5b)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
117742585 (pds5b)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
117742585 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
TPR_IPO5
EnP1_C
Motif
Other DBs
NCBI-GeneID:
117742585
NCBI-ProteinID:
XP_034405994
Ensembl:
ENSCLMG00005003459
LinkDB
All DBs
Position
14:complement(12528450..12557284)
Genome browser
AA seq
1409 aa
AA seq
DB search
MAHSKARVTDGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYSIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEFLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNFVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPHNLETAERMKCLYYL
YATLDTNAVKALNEMWKCQNLLRHNVKDLLDLVKKPKSEASSKAVFAKVMVITKNLPDPG
KAQDFVKKLAQVLDEDERVRDQLETLVSPSCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGSKLEESFPHIKSVLLPVLQAKAKR
GLPRQAKYAIHCINAMFTNRDTHFAQIFEPLHKGLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVPDEEVSPETLAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFSQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHARQ
CLVKNVNIRREYLKQHAAISDKLFSLLPEYVVPYTIHLLAHDPDYVKLQDIEQLKEIKEA
LWFVLEIIMAKNDNNSHAFIRKMVENIKQTKDAQAPSDPKTNEKLYTVCDVAMHIIMSKS
TTYSLESPKDPVLPSCFFTKPDKNFSNTKNFLPPEMKSFFTPGKPKSANVLGAVNKSLSS
AGKQLQSKASRMETASNDDPSSNPGSPQRSKTRLDSTEMDHSENEDISLKRADSTDKDIE
KPRGRKRGVASSEDQDSKPKRGRKKAAANTAAVAESEEQWDEDNRPEDEQNSPPKKGRRG
RPPKSATPSQDTPAKGKRGRKKAAPPPEDEEEEEEEEEKEEEAAAEVEEEAEDDGSSENI
ELKTKGGRPARTPRRSQGSTESAESTPQKRRGRPPKSAQPPAKKPARGGRSKAATAKDDS
EEEEQEEEEEEQEEEPTPKGRKKPAARRR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagtcacagatgggaaggtgacctaccctccaggggtcaag
gagatctctgacaaaatctccaaagaggaaatggtccgcaggctcaagatggttgtaaag
accttcatggacatggatcaggactccgaggaagagaaggagctgtacctgaacctggcc
cttcacctggcctcagacttcttcctcaaacacccagacaaggacgtgcgtctactggtg
gcttgctgtctggcagacatattcaggatttacgccccagaggcgccctacacctcccca
gataaactcaaggacatttttatgttcatcacaagacagctcaaaggactggaggacact
aaaagcgcccagttcaacagatacttctatctgcttgagaacatagcatgggtgaagtct
tacaatatttgctttgagcttgaagacagcaatgagatattcacccagctttacagaaca
ctcttccaagtcatcaacaacggccataaccagaaggtgcacatgcatatggtggacctg
atgagctccatcatctgcgagggagacactgtatcacaggagctgttggacaccgtgttg
gtcaacctggtgcctgcacacaagaatttgaataaacaagcgtatgacctggccaaagct
ctgctgaagaggactgctcaggctattgaaccgtacatcaccaatttcttcaaccaggtg
ctgatgctggggaagacctcagtcagtgatctgtctgaacatgtttttgacctcatcttg
gagctttacagcatagacagccacctgctgctctcggtgctgccgcagcttgagtttaaa
ctcaagagtaatgataatgacgagaggctgcaagtagtgaagcttctggctaagatgttt
ggagccaaggactctgagttggctgcacagaataaaccactctggcagtgttacctcggc
aggtttaatgacatccatgtgcctatcaggctggagtgtgttaagtttgccagtcattgt
ctcatgaaccacccagacttggccaaagacctcacagaattcttgagggttagatcacat
gacccagaggaggccatccgccatgatgtcatcgtttctatagtaactgctgccaagaaa
gacttgtctctagtgaatgatgcattgctcaattttgtaaaggagaggacgttggacaag
agatggcgtgtacgtaaggaggccatgatgggcctggcatcgatctacaggaagtactcg
ctgcagggggagggagggagggaggcctctaaacagatttcctggataaaagacaagctg
ctccatatctactaccaaaacagcatcgatgacaggttgctggtggagcgggtctttgcc
cagtacatggttcctcacaacctggaaaccgctgagaggatgaagtgtctttactacctg
tatgccaccctggacacaaatgctgtcaaagctttgaacgagatgtggaagtgccagaat
ctgctgaggcacaatgtcaaagacctgctggacttggttaaaaaacctaagtctgaagcg
tcgagcaaggccgtatttgccaaggtcatggtgatcacaaagaacctgccggacccgggc
aaggctcaggactttgtgaagaagctggctcaggttctggatgaagacgagcgggtcaga
gatcagttggaaaccttggtcagcccctcatgctcctgcaagcaagctgaagtctgcgtg
cgagacatcactaaaaagcttggcagccccaaacagcccagcaatccattcctggaaatg
gtcaagttccttctggaaagaattgcgcctgtccacatcgacacagaatccatcagtgcg
ttgataaagcaggtcaacaaatctattgacggaacagctgatgatgaggaggagggcgtc
cccactgaagaggccatcagagcaggactggaactgctgaaggtgctttcgttcacacac
ccggtttcattccactctgcagagacgtttgagtctctgttgggttgtctgaagatggat
gacgagaaggtcgcggaggctgctctgcagatcttcaagaacactggcagcaagttggaa
gagagttttcctcatattaaatccgttttgctgcctgtactgcaggccaaagccaaaagg
gggctgcctcgccaggccaagtacgccatccactgcatcaacgccatgttcaccaacaga
gacacacacttcgcccaaatcttcgagcctctgcacaaaggcctagaccccgctaacctt
gagcagctcatcactcctctgaccaccctgggtcatctggctcagctggccccagaacag
tttgctgcaccgctcaaatctctagtcgccaacttcattgtgaaggatctgctcatgaat
gacaggatcccgggcaagaagacaaccaaactttgggttcctgatgaagaagtgtcccca
gagactctggccaagatccagggcataaagctgatggtgcggtggttactaggagtgaag
aacaatcagagcaaatcgggcaactccacgctgaggatgctgactgctattctacacagt
gatggcgacttaaccgagcagggcaggatgggtaaaccagacatgtcgaggctgcggctg
gcagcagcgtgcgccctgctcaagctggcacaggagccctgctatcatgaaatcatcaca
ctggagcagtaccagctgtgtgcgctcgtcatcaacgatgagtgctaccaggtgcgacag
tgtttttcccagaagctccaccggggcctgtgccgcctccgtctgcctctggaatacatg
gcagtgtttgcgttgtgtgccaaggaccctgttaaggagaggagggctcacgctcgccag
tgcctggtgaaaaatgtcaacatacgcagagagtacctcaaacagcatgctgccatcagc
gacaagctgttctctctgcttcccgagtacgtggtgccctacaccatccacctgctggca
catgacccggactacgtcaaattacaggacattgagcagctcaaagaaattaaagaggct
ctgtggtttgtcctggagattatcatggctaagaatgacaacaacagccatgccttcata
aggaaaatggtggaaaatatcaaacagacaaaagatgcccaggcccccagcgatcccaaa
accaacgaaaaactctacacagtgtgtgatgtagccatgcacattatcatgtcaaagagc
accacctacagcctagagtctccaaaagaccccgtactgccctcatgcttcttcaccaaa
cccgacaagaatttcagcaacacaaaaaactttctcccgccagagatgaagtctttcttc
acacctggaaagcccaagtcggctaacgttttgggtgcagtaaacaagtcgctgtcgtca
gcggggaaacagctccagagtaaagcttcacgtatggagacggcgagcaacgacgacccc
tcgtccaacccaggctccccacaacgcagcaagaccaggcttgacagcacagaaatggat
cacagtgaaaacgaggacatcagcctaaagagagcagacagcactgacaaggatattgaa
aaaccccgcggtcgcaaacgaggcgtggcctcgagtgaagaccaggacagcaaaccaaaa
cgaggacgcaagaaggcggcggccaatacagccgcagtggccgagtccgaggagcagtgg
gacgaggacaaccggccagaggatgagcagaacagcccgccgaaaaaaggacgcaggggc
cgccctccaaagtctgctactcctagtcaggatactcctgccaagggaaagaggggccga
aagaaggcagctcctccgccagaggatgaagaggaagaggaggaggaggaagaaaaggag
gaggaagcagcagcagaggtcgaggaggaagcggaggatgacgggagcagtgaaaatatt
gagttgaagacgaagggaggcaggccggccaggacgccgaggcgatcacaaggcagcaca
gagtcagcagagtctacaccgcagaagaggagaggacgaccacccaaatcagctcagccg
cctgccaagaaaccggcgcgtggtgggcgatcgaaggcagctactgctaaagacgactct
gaggaagaggagcaggaggaggaagaggaggagcaggaggaggagccaacaccgaagggt
cgcaagaagccagcggcgcgaagaagatga
DBGET
integrated database retrieval system
