Cyclopterus lumpus (lumpfish): 117742619
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Entry
117742619 CDS
T09199
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117742619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117742619
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
clum04031
]
117742619
Membrane trafficking [BR:
clum04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
117742619
GTP-binding proteins [BR:
clum04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
117742619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-GeneID:
117742619
NCBI-ProteinID:
XP_034406044
Ensembl:
ENSCLMG00005005631
LinkDB
All DBs
Position
14:14163243..14168286
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AA seq
213 aa
AA seq
DB search
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEAQSHVQPHNIVFLL
VGHKCDLEVQRQVTQQEAEKLAGAYRMRYVETSARESINVEKAFVDLTKDIFELVRSGDI
TIQDGWEGVKSGLVPNTVHSSEEVTKGSRQCFC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagacgatatggctttatcagttccgtctgatcgtcatcggagactccacggttggc
aagtcgtgtctgatccggaggttcactgagggacgcttcgcccaggtgtcagacccaacg
gtgggggtggacttcttctctcgcctggtggagatcgagccgggcaagagaatcaaacta
cagatctgggacactgcggggcaggagaggttcaggtccatcaccagagcctactaccgt
aactcagtgggagggctcttactcttcgacatcacaaaccgccgttccttccagaacgtc
cacaactggctggaagaggcccagagccacgtccagccgcacaacatcgtcttcctgctg
gtcggtcacaagtgtgacctggaggtccagcgtcaggtgacccagcaggaggccgagaag
ctggcgggggcctaccggatgcgttacgtggagacatcggcacgagaatccatcaacgtg
gagaaggcatttgtagatctgacgaaggacatctttgagctggtacggagcggggacatt
acgatccaggatggctgggagggcgtcaagagtggattggttcctaacaccgtccattcc
tccgaggaggtcaccaagggcagccggcagtgcttctgctga
DBGET
integrated database retrieval system