KEGG   Cyclopterus lumpus (lumpfish): 117742619
Entry
117742619         CDS       T09199                                 
Name
(RefSeq) ras-related protein Rab-39B-like
  KO
K07925  Ras-related protein Rab-39B
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117742619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117742619
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:clum04031]
    117742619
Membrane trafficking [BR:clum04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    117742619
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    117742619
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU AAA_22
Other DBs
NCBI-GeneID: 117742619
NCBI-ProteinID: XP_034406044
Ensembl: ENSCLMG00005005631
LinkDB
Position
14:14163243..14168286
AA seq 213 aa
METIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHNWLEEAQSHVQPHNIVFLL
VGHKCDLEVQRQVTQQEAEKLAGAYRMRYVETSARESINVEKAFVDLTKDIFELVRSGDI
TIQDGWEGVKSGLVPNTVHSSEEVTKGSRQCFC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggagacgatatggctttatcagttccgtctgatcgtcatcggagactccacggttggc
aagtcgtgtctgatccggaggttcactgagggacgcttcgcccaggtgtcagacccaacg
gtgggggtggacttcttctctcgcctggtggagatcgagccgggcaagagaatcaaacta
cagatctgggacactgcggggcaggagaggttcaggtccatcaccagagcctactaccgt
aactcagtgggagggctcttactcttcgacatcacaaaccgccgttccttccagaacgtc
cacaactggctggaagaggcccagagccacgtccagccgcacaacatcgtcttcctgctg
gtcggtcacaagtgtgacctggaggtccagcgtcaggtgacccagcaggaggccgagaag
ctggcgggggcctaccggatgcgttacgtggagacatcggcacgagaatccatcaacgtg
gagaaggcatttgtagatctgacgaaggacatctttgagctggtacggagcggggacatt
acgatccaggatggctgggagggcgtcaagagtggattggttcctaacaccgtccattcc
tccgaggaggtcaccaagggcagccggcagtgcttctgctga

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