Cyclopterus lumpus (lumpfish): 117742658
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Entry
117742658 CDS
T09199
Symbol
capn5b
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-5
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117742658 (capn5b)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C2: calpain family
117742658 (capn5b)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Motif
Other DBs
NCBI-GeneID:
117742658
NCBI-ProteinID:
XP_034406111
Ensembl:
ENSCLMG00005002777
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All DBs
Position
14:5320997..5346221
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AA seq
659 aa
AA seq
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MFTSVKAFDGQQYSTLKRQCLQSGLLFEDPRFPAIDDSLFYQGNRIGRVVWKRPRELCED
PHLFVDGISAHDLHQGQLGNCWFVAACSSLASRESLWQKVIPDWKEQEWDTEKPESYAGI
FHFRFWRFGEWVDVVIDDRLPTVDNQLVYCHSNDSNEFWSAMVEKAYAKVYGCYEGLDGG
NTADALVDFTGGVSEPVDLLEGQMVTDEVARNQLFERVLKVHNRDGLISCSIRATTIEDM
EARLDCGLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLQMIRMRNPWGEKEWSGPWSDSSE
EWNKVSKSEREKLGVTVQDDGEFWMTFDDFCQYFTDIILCRLINTSYLSIHKTWEEEVMR
GSWVHRQDPLRNRSGGCINHKATFLQNPQYVFDVKKVEDEVLICLQQKEKRATPKEGKGE
NLAIGFDIHRVELNRKYRMHSAQQKVAGSIYINSRCVFLRKDLQEGRYVIIPTTFDPGQQ
GDFLLRVFTDVPSDCKELTLDDPPQTCWTGMCGYPQLVTQVHVMNAEGLQGQDTNGELHC
LNPNKERLLSKVQALDPYVIITCEGERVRSPVHKDTRCPNFDIKGLFYRKKPKEGIHIEI
YNKNMIVDTFLGQVILFSDPNERQEQHTLHLRDKGSRQDNDLPGTLTVRLITATTLTNI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttcagtgaaggccttcgacgggcagcagtactccaccctgaagaggcagtgc
ttgcagagtggcctgctctttgaagacccccgcttccccgccatcgacgactcgctgttc
taccaggggaacaggatcggacgtgtggtctggaagaggcctcgggagctgtgtgaggac
cctcacctgtttgtggatggcatcagcgcacacgacttacatcaggggcagctgggtaac
tgctggtttgtagcggcgtgctccagtctggcctccagagagtctctgtggcaaaaagtc
attcccgactggaaggagcaggagtgggatacggagaagccagaatcgtacgccgggatt
ttccacttccgcttctggcgcttcggtgagtgggtggacgtggtgatcgacgaccgtcta
ccgacggtggacaaccagctggtctactgccactccaacgacagcaacgagttctggagc
gccatggtggagaaggcctatgccaaggtttatggctgctacgagggtttggacggagga
aacacggccgacgcgctggtggatttcacgggcggtgtttcagagcccgtggacctgctg
gagggtcagatggtgactgatgaggtggcccgaaaccagctgtttgaaagagttctcaaa
gtccacaacagagacggtctcatcagttgctccatcagggcgaccacgatagaggacatg
gaggcacggctggactgtggcctggtcaaaggtcatgcctacgccgtgacggacgtgcgg
aaagtgaggctaggtcacggactgctggcctttttcaaatccgaaaagctgcagatgatc
cgcatgaggaacccctggggagaaaaggagtggagcggcccctggagtgacagttcggag
gagtggaacaaggtgagcaagagtgagagagagaagctcggcgtcaccgtgcaggacgac
ggcgagttctggatgacgttcgatgacttctgccagtacttcactgacattatcctgtgc
cgcctcatcaacacctcctacctgagcatccacaaaacctgggaggaggaggtgatgagg
ggctcctgggtccaccgccaggacccccttcgcaaccggtcaggaggctgcatcaatcac
aaggccactttcctgcagaacccccagtacgtgtttgatgtaaagaaagtggaggacgag
gtgctgatctgcttacagcagaaggagaagagagccacacccaaagagggcaaaggggaa
aacctcgccataggctttgatattcaccgggtggagctaaatcgtaagtaccgtatgcac
tcagcccagcagaaagtagcgggctccatctacatcaactcgcgctgcgtcttcctcagg
aaggatctgcaggagggccgttacgtaatcattcccacaacctttgaccccggtcagcag
ggcgacttcctgctccgcgtcttcactgatgtgccttcagactgcaaagagctgactctg
gatgaccctcctcagacatgttggacggggatgtgtggctaccctcagctggtcactcag
gtccatgtaatgaatgctgaaggcctgcagggacaggacaccaacggagagcttcactgc
ctcaatcccaataaggaaagacttctgagcaaagtacaagctttagacccgtacgtgatc
atcacctgtgaaggagagcgggttcgttcgcccgttcataaggacacgcggtgcccaaac
ttcgacatcaaaggcctgttctaccgcaagaaacccaaagagggcatccacatcgagatc
tacaacaagaacatgatcgtggacaccttcctgggtcaggtgatcctgttcagcgacccc
aacgagcgccaggagcagcacacgcttcacctccgggacaagggcagccgccaggacaac
gaccttccgggcacgctcactgtgcgtctcatcaccgcgaccacgctcaccaacatctga
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