Cyclopterus lumpus (lumpfish): 117742700
Help
Entry
117742700 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742700
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117742700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
117742700
NCBI-ProteinID:
XP_034406172
Ensembl:
ENSCLMG00005022744
LinkDB
All DBs
Position
14:complement(15067629..15074471)
Genome browser
AA seq
1005 aa
AA seq
DB search
MEKLTPEQWREIMNKKMRFPPELIGAIQEGKIELLSGLLKTGDGILRQLDESEDRQWREA
LNLSIRLGNESCMDALLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVAMLTQKGHIIPWPHKISCSCLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSDDAMLRAFTLSRELRKLSKKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLSGWRGSRTAWKLFISVGIFFTMPFLCLIYWIAPKSKVG
KILKTPVIKFLLHSASYLWFLITLLGESITMEMYKAKFASRTQDILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVLIVLKGYFLCHDYNGTADCIYF
TKTERQDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQEYVDMQQYVLAEF
VGRVLYGIFTLVIVIVLLNMLIAMITNTFQKIEDDADVEWKFARSKLYLSYFREGLTIPV
PFNIIPSPKAVFYILKAIFRKICCCCTSNSEDRYPALASMTNDKGSEDSPLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITLLTKVVTRMHSDMKVVHQVLIDGHPASDALTKDG
SSFLGKYITGAKNNFIGFNSRHDDTNTSLKVTVHHGEEGVDKEKLDSDTKQESDAQQNEA
SECSAGGSKPVTDCDVLKMEEGRAQIEPGDEKETEKKEQVEADKNEVKEGVVAGTSFNHG
GEKQKTEAPQDEAEKRREGETLTVGKVCEKQTETTSQQAERIKAKWMKGRTCEHDGAEKS
GFRESDAKPGAKKTIPSPTGSGSSQDTGFGSQEGQGSLDGTSVRP
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctcacgcctgaacaatggcgcgagatcatgaacaagaagatgcggttccct
ccggagctcatcggtgccattcaggaggggaaaatagagctgctgtctggactgttgaag
accggcgacggcatcctccgccagctggatgagtccgaggatcgccagtggagggaggcc
ctgaacctgtccatccgcctgggcaacgagagctgcatggacgccctcctgcagggggtt
aagtttgacttccggcagattcacgaggccctgctagtcgctgtagacaccaatcagcct
agagtggtgaagcgcctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cgctccttctctcaggccatctttgaccactctattgacaactcccagtttgcccctggt
gtgactcctttgacgttagcctgccagaaagacctgtatgacatagtggccatgctcacc
caaaaaggtcacatcatcccgtggccacataagatatcctgttcctgtctggagtgtcgt
aacggccgacagtacgaccttctgaagttctccttgtctcgtatcaacacctatcgtggc
atcgccagccgcgcctacctgtccgtcacctctgacgacgccatgctcagagctttcact
ctcagcagagagctccgtaagctctccaaaaaagagccagagttcaagcctcagtatctg
ggcctggaggagctctgtcaggagtttgctgttgagttgctgggcatgtgtcgcaaccag
agcgaggtgaccaccatcctgaacagctgtggagacgagagccaggactccttagaggag
caggcctttgaggaggggatccccaacctgtcacgtctgcggcttgctgtcaactacaac
caaaagcagtttgtggcccacccaatctgccagcaggtgctgtcatctatctggtgtggg
aatctgtcaggttggagaggcagcaggacggcctggaagctgtttatctctgtggggatc
tttttcaccatgcccttcctctgcctcatctactggatcgcaccaaagtcaaaggttggg
aagatactcaagactcctgtgatcaagtttctcctccactctgcctcctatctgtggttt
ctcatcacgttacttggagaatcaataacaatggagatgtataaggcaaaattcgcttcc
cgcacgcaggacatcctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tacgagtgtaaggaagtgtggatcgaggggttgcggagttacttcctggactggtggaac
tgcttggatgtgatggtgctcagcatgtacctggcgtccttcgcgttacgcgtgcttata
gtgctcaaaggctacttcctctgccatgattataacggcacggcggactgcatctacttc
actaagactgagcgccaggattggcatcaggaggacccccagttgattgcggaggtgctg
tttgcagtgaccagtatgttgagctttacacggctagcgtacatcctgccagcacacgag
tctctgggaactctgcagatctccatcgggaagatgattgatgacatgatgagatttatg
tttatattgatgatcatcggaacagccttcctctgtggcatcaacaatgtctatgttcct
tatgtcatctctccacatcttggcaggtttaatgagacgttccacttcttattctggacc
atgtttggcgtcgccaaccaggaatacgtggacatgcagcagtatgtgttggccgagttt
gtcggaagggttctgtatggcatcttcacgctcgtcatcgtcatcgtcctgctcaacatg
cttattgccatgatcaccaacacctttcagaaaattgaggacgatgcagatgtcgagtgg
aaatttgccagatcgaagctgtacctcagttacttcagagagggcctcaccattcctgta
cccttcaacatcatcccctcacccaaagctgttttttacatcctaaaggccatctttaga
aaaatctgctgctgctgcacttctaattctgaggacagatatcccgctctagcctctatg
accaacgataagggatctgaagacagcccgttgccttaccgccagcaggtgatcagagct
ctggtgcaacgctacattgaatcagcacgcagggagttcgaggagaccaagaggaaagat
atcggtaatcggatcactttgttgaccaaagtggtaacaaggatgcacagtgatatgaaa
gtggtccaccaggttttgatagatggacaccctgcaagcgacgcattgaccaaggatggc
tcctcctttctggggaaatacatcactggtgccaagaacaacttcataggttttaacagc
agacatgatgacacaaatacatcacttaaagtgacagtgcaccatggagaagaaggtgtt
gataaagaaaagcttgactcggatacaaaacaagagtcagacgcgcaacagaatgaggcg
agcgaatgtagcgcagggggatcaaagccggtaacagactgtgatgtgctgaaaatggag
gaaggcagagctcaaatagagccaggagatgagaaggaaactgagaaaaaagagcaggtg
gaagcagacaaaaatgaagtgaaagagggagtggtggcaggaacgagttttaatcacgga
ggagaaaagcaaaaaacagaggccccacaggatgaagcagaaaaaagaagagagggagag
acactcacagtggggaaggtgtgtgaaaaacaaacggagacgacctcccagcaagctgag
cgcatcaaagcgaaatggatgaagggtagaacatgtgagcatgatggagcagagaagtct
ggtttcagggagagcgatgcgaaacctggagccaagaaaacgattccctcgccaacaggc
agcggcagctcccaggacaccggctttgggtcccaagaagggcaggggtcgcttgacggg
acctcagtgaggccgtag
DBGET
integrated database retrieval system
