Cyclopterus lumpus (lumpfish): 117742736
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Entry
117742736 CDS
T09199
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117742736 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742736 (chrne)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117742736 (chrne)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117742736
NCBI-ProteinID:
XP_034406239
Ensembl:
ENSCLMG00005022500
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All DBs
Position
14:complement(14924065..14931046)
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AA seq
518 aa
AA seq
DB search
MMATRRFWIFFGVVTVLGTLMVRVQCNEESKLISDLFQGYNKNIRPVVHPEDKLEIQIKL
TLTNLISLNEKEETLTTNVWIEIQWTDYRFTWNESHYYGIDVIRVPCKTVWLPDIVLENN
IDGKFDVAYYANVLIGSNGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSANE
VDLILAVGDTGETIEWVDIDPEAFTENGEWAIVHRPGRKMINTRYTKDDLEYQEILFNLV
IQRKPLFYVINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKIP
ETSLSVPLIGKYLIFVMSVTTLIATNQIVVLNISLRNPSTHTMSNTIKHVFLEMVPRFLG
MAPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVD
NMDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTRQQNNIGSEIESWVLIGKMIDKVCF
WAAILLFIIGTVWIFLTGHFNRAPEFPFPGQSKKFVPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacacgcaggttttggatattttttggagtcgtcactgttctcgggacttta
atggttcgggtgcagtgtaatgaggagtccaagctgatcagcgacttgttccaaggctac
aacaagaatatccgcccagtggttcatcctgaagacaagctggagattcagatcaagctg
accctcactaacctcatctccctgaatgaaaaggaggagacgcttacgactaatgtgtgg
attgagattcaatggactgattatcgctttacctggaacgaatctcactattatggcatt
gatgttattcgtgtcccgtgcaaaactgtctggctccctgacattgtcctggagaacaac
attgatggcaagtttgatgtggcttactacgccaatgtgttgatcgggagcaatggttgg
atgtactggctgcctcctgctatctatcgcagcacgtgtgccattgagatcacctacttc
ccatttgattatcaaaactgcacgctagcattcagatcccaaacgtacagtgccaatgaa
gtcgacctcatcttggctgtcggagatacaggtgaaactattgagtgggtggacatcgac
cccgaggctttcacagagaatggcgagtgggccatcgtccatcgtccaggcaggaagatg
atcaacacacggtacaccaaagatgacctagagtatcaggagatcttgttcaatctggtc
atccaaagaaagcccctcttctacgtcatcaacatcatcctgccctgctccctcatctcc
tcattggtggtgctggcctacttcctacctgcacaagccgggggacaaaagttgaccgtg
tccatctctgtcttgctggctcagactgtcttcctctttcttattgcccagaagatccct
gagacatcgctctcagtgcctctcatcggcaagtacctgatctttgtaatgtctgtcact
actctcattgccacgaatcaaattgtggtgctgaacatctccctgcgtaaccccagcact
cacaccatgtcgaataccatcaaacatgtgtttctggaaatggtacctcgcttcctgggc
atggccccactggtggatgacagtgaggtgacaaccgaggtgaacggagtgagggagcgg
cggcgcagctcctttggcctcatgcagagagcagaggaatatgtactgaagcaacctcgc
agtgaaatgatgtttgacaaacaaagagagaggcatggtctcacacgatccattgtggat
aatatggatgtcagcagcaccgctaacctgtataagagtttggcccaagctgcacccgag
atcaagcaatgtgtggatgcctgcaacttcattgctgagagtacgagacaacaaaataac
attggatctgaaattgaaagctgggtactgattgggaagatgatcgacaaggtgtgtttc
tgggctgccattctcctcttcatcattggcacagtgtggatcttcttaacgggacacttc
aatcgggcgccggaatttccgtttccgggacagagcaaaaaatttgttccgagttaa
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