Cyclopterus lumpus (lumpfish): 117742764
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Entry
117742764 CDS
T09199
Symbol
robo4
Name
(RefSeq) roundabout homolog 1
KO
K06784
roundabout, axon guidance receptor 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117742764 (robo4)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
ROBO family
117742764 (robo4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
117742764
NCBI-ProteinID:
XP_034406275
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All DBs
Position
14:22773896..22793065
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AA seq
1113 aa
AA seq
DB search
MRVGAWLLWVSWFCTWAEFSQRCECQDTCPTESGLDSRSRSRVKGHARHGVGHQHPPHRS
RPHSRKGSRVHAQETAPRIVHHPADVVVKVGNPATLSCRADGSPKPTIEWLRNGQPLETK
GDGQLQPIVLSEGSIFFLSVGGGRRGQSHEGVYTCVARSSAGKATSRNASLYIAVLQEEF
SLQPSDVEVAEGEVAVLNCGPPMGHPEPNVIWKKNGLAINNSDHHYTELSGKLIVAPAEK
KHSGAYVCVASNTGGVRESRAARLSVLAKPALVLKPDDVSVRMGESAHFYCQAKGDPPPA
VVWSREQGPLPNGRYLVNPDHTLQIHYVTAQDAGKYTCTAVNDAGVVRASAQLLVEEATS
TKQRDLHKELSALRVALENVTIVAPGSNVSRVQWKLQSLPAQPHYLDGFEVLYRSLLPAS
SDWAAKRVALPSFQAPVGPLKRGYKYEFKVRPYGSNLYGRESNTRHLRVPETVPSAPPLA
VSITVSHEQNDTIHLSWGPPPHEAHNGLIQGYQVFCVESEEQQYQNWTVDSGQHNLDIST
LKPGRRYWITIAAVNGAGVGMLSDPQGFVINPQIGPPPESDGQRRDLSQVMALLQDPVLI
GSIGALLWCVLMVAAVFLFRRHSRTGHLIPGRGRAKGLRRLASEDLIIKHRMAAPDSPWI
SGGWRPAFNQKYQDLWAHGQKHPGLRGTSLPTSWKDLGRVDSAVPVVTDSCGVYGTFYVD
LVGSGLKTFNSPRCGPKMPHGPPHQQGAETIQIFPRPVGKTPPLGSREALPWKQAIRPQP
KMGVLRESWEKSHSKQELHAVNSVPIVPTRNQACPSRLYKQRLSHVPSGRREWDGVAGCP
RLLHCSASLHLVDMLPPPPPTPMEDTTDTHSFSSDEGSSRSTRLTGDTGSLPSVCAVSSR
RGQPRAAAAHGCSSCSPPSTTSYSSSVDGEHGGTLTAQEAALYLELSPKPERCSALPEQH
PSLPHPFPPAGGEPEFPPIGLRHARLRSTPSSCYSEWDSSLWNTWSSITDGNMASARTSL
ISSVDSCYTNDSAQLARLLAAGAESTSGASLSDFSPPASPLSASYPSFRAEGDSFGELEP
VPAWDWSSAWVEDMEARCRAHYPGTERYNATEY
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcggtgcgtggcttctctgggtgtcctggttctgcacctgggcagagttctca
cagaggtgcgagtgccaagacacgtgtccaaccgagtcaggactggacagcaggtcgagg
agccgggtcaaggggcatgctcgtcacggcgtgggacaccagcaccccccccacaggagc
aggccgcacagcagaaaaggttccagagttcatgcccaggagacggcgccccgcatcgtc
caccacccggccgacgtggtggtgaaagtggggaaccccgccacgctctcctgcagggcg
gatggcagccccaagccgaccatcgagtggctgcgcaacggccagcctctggagacgaag
ggagacggacagctgcagcccattgtcttatcggaggggagcatcttcttcttgagcgtg
ggggggggcagacggggtcagtcacacgagggcgtctacacctgtgtggcccggagcagt
gccggcaaggccaccagccgcaatgcatcactgtacatcgcagtgttgcaggaggagttc
agtttgcagcccagtgacgtggaggtggcagagggggaggtggcggtcttgaactgtggc
cccccaatgggacaccctgagcccaatgtcatctggaagaagaacggcttggccatcaac
aactcggatcaccactacactgagctgagtgggaagctcatcgtcgctcccgcagagaag
aagcactctggtgcctatgtgtgcgtggccagcaacaccgggggagtgagggagagcagg
gcggcccgcctctccgtgctggccaagccggcgttggtgctgaagccagacgacgtgtcc
gtgaggatgggggagtccgcccacttctactgtcaggccaaaggggaccccccgcctgct
gtggtctggagccgagagcaggggccactgcccaatggcaggtatcttgtaaacccggac
cacactctgcagatccactacgtgacagcccaggatgctgggaagtacacctgcactgca
gtcaatgatgccggtgtggtcagggccagcgcacagctgctagttgaagaggccaccagc
actaaacagagagacctccacaaagagctgtcagcactgcgagttgctctggaaaacgtc
accatcgtggcccccgggtccaacgtatcgcgagtccaatggaagctccagtcgcttcca
gcccagccgcactacctggacggctttgaggtgctctatcgctctctgctgcctgccagc
tccgactgggcagcgaagagggtggccctgcccagcttccaggctccagtgggcccctta
aagaggggctacaagtacgagtttaaagttcggccctatggcagcaacctgtacgggagg
gagagcaacacccggcacctccgagtccccgagacggtgcccagtgcccctccactggct
gtgtccataacagtgagccacgagcagaatgacaccatccatttgagctgggggcctcct
cctcacgaagcccacaacggcctcatacagggataccaggtgttttgtgtggagtctgag
gagcagcagtaccagaactggacggtggacagcggccaacataacctggacatctccacc
ctgaagccagggagacggtattggatcaccatagcagctgtcaacggggccggagtggga
atgctgagcgaccctcaaggatttgtcatcaacccacaaataggccccccccctgagtca
gacggccaaagacgggatctgtcccaggtcatggccctgcttcaggacccagtgttgatc
ggaagcatcggcgccctcctgtggtgcgttttgatggtggcggctgtcttcctcttcaga
cgccacagcaggacaggccacctgataccaggacggggccgggccaaaggtttgcgcaga
ctcgccagtgaagatctcatcattaagcacaggatggcagctccagactccccttggatc
tctggaggctggagacctgccttcaaccagaagtatcaggacctctgggcccacggtcag
aaacatccaggactcaggggcaccagcctcccgacctcctggaaggatctcggccgcgtg
gactcggccgtccccgtcgtgaccgacagctgcggcgtttacggcacgttctacgtggac
ctggtgggcagcggcctcaagaccttcaacagtcccaggtgtggccccaagatgcctcac
ggtccgccccaccagcagggggccgagaccatccagatattccctcggcctgtcggcaag
accccgcccctcggcagccgggaggcgctgccatggaaacaggccatacggccccagccc
aagatgggtgtgctgagggagtcgtgggagaaaagccacagcaagcaagagttgcatgca
gtgaacagcgtccccatagtgccgaccaggaaccaggcgtgtccgtccagactctacaaa
cagagactcagtcacgtcccgtcaggccggcgcgagtgggatggagttgccggctgccct
cgcctgctgcattgctctgcatcattacacctcgtggacatgctgccccccccaccaccc
acgcccatggaggacaccacggacacacacagcttctcctcagatgaaggctccagtcgc
tctacgaggctcacaggggacacgggctctctcccgtcggtgtgcgctgtgtcgagtcgc
cgcgggcaaccacgagccgccgccgcccacggctgctcgtcctgcagccccccgtccact
acgtcctactcctcgtccgtggatggagaacatggcggcacgctgacggcacaggaagcc
gccctgtatctggagctcagccccaagcctgagagatgcagtgccttgcctgagcagcac
ccctccctgcctcaccccttcccacctgctggcggcgagcccgagttcccgccgataggc
ttgcgacacgcccgcctccggagcacaccctcctcctgctacagcgaatgggacagctcg
ctgtggaacacctggagctccatcaccgacggcaacatggccagcgctcgcaccagcctc
atcagctcggtggacagctgctacaccaacgacagcgctcagctcgcccgcctgctggcg
gcgggggcggagtccacgagcggagcctctctgtcagacttctccccgcctgcctccccc
ctcagcgcctcgtacccgtcgttccgtgcggagggcgactcgttcggtgagctggagccg
gttcccgcgtgggactggagctcggcctgggtggaggacatggaggctcggtgcagagcc
cactatcccggcactgagagatacaacgccactgaatactga
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