Cyclopterus lumpus (lumpfish): 117742792
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Entry
117742792 CDS
T09199
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117742792
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117742792
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
Sina_ZnF
F-box
Motif
Other DBs
NCBI-GeneID:
117742792
NCBI-ProteinID:
XP_034406319
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All DBs
Position
14:13431846..13436940
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AA seq
703 aa
AA seq
DB search
NQSQRSRASRVRQHVHCDSCYSRRCRARVEVSVCCALIPCRLHCGALFHLCKEEDHLLLC
PNVRVPCLNAEYGCPLHLTRSSQAAHLQVCPASVVCCSMEWNRWPANDAHSYPNTELHKN
LLRGREQGRCLDLAMALKDQDLLFHSMKMRELFPELTQSVEKDEKEKREERRKEKQKKEA
AEKAAVKEASDHTWETFNLQTPDEKEEEDEDEVDVEYEQELTQEEREAIARDTEVNADVL
ENYNTWERMFSMEIGGCRNAGEAAMAIRDQGLSKGGGEASDSGMDASASNTCRQGSSACF
ASSTSSSCLAERLKIREFVYGSVEPMKIITVRTFTTPSSFAARQSRIRNPSFYKREHRAV
DTSDLGVMLEEMPVWEEVQASLLCSLEKEQRGHLIAESKCTDALLQDEGTQTYNFLSAPF
RRETSLADLTAAKPLELHLQLQVESVTSRHHKASSAFTFLCGHTFQRREYGKHYKNVHSD
IQMGVNGWFEQRCPLAYLGCTYSQTRLQPSTHEATVSYNEDLGCFSLHPTIHVSLSEASQ
PSGSSVDSSTAQRRRGGRGGGGEDSLSSLPYEVLCHMARFLDSLSLSQLALVSQLMRQVS
SSLLQERGMVTLRWEKKTYSHGGAKWRVKHTVWQFSTLFSPVDDWCFQNVPSMSEHLKVC
PCYERESRTEKIHLPHVGGETAQTKTSCEGPTLTAFQKKRIVM
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
aatcagagtcagcgttctcgggcctccagagtgcgacagcatgtccactgtgattcctgc
tacagccggcgctgcagggctcgggtggaggtctctgtgtgctgtgctctcatcccctgc
cgcctgcactgtggagcgctcttccacctttgtaaagaggaggatcacctgctgctctgc
cccaacgtgagggtgccgtgcctcaacgccgagtacggctgcccgctccacctgacccgc
tcctcgcaggccgctcacctccaggtgtgtccggccagcgtcgtgtgttgctccatggag
tggaaccgatggccggccaacgacgcccattcttatccaaacacagagctgcataaaaac
ctgctcaggggaagagagcagggaagatgtctggacttggccatggccctgaaagaccag
gacctcctgtttcactccatgaagatgagagaactgttcccagagctgacccagagtgtg
gagaaggacgagaaagaaaagagggaagagaggaggaaggagaagcagaagaaagaggca
gcagaaaaggcagctgtgaaggaggccagtgatcacacttgggagacttttaacttgcaa
acccctgatgaaaaagaagaagaggatgaagatgaggttgacgttgaatatgagcaggag
ctaacccaggaagagagagaggctattgccagggacacagaagttaatgctgatgtgttg
gaaaactacaacacctgggagcgcatgttcagtatggagataggtggctgcaggaacgct
ggagaggcagcaatggccatcagagaccaggggctttctaaaggaggaggagaagcatca
gatagcggtatggatgcctctgcatcaaacacctgccgacaggggagcagtgcatgcttt
gcttcctccacatcctcctcttgtctcgctgaaagactgaaaataagggaatttgtgtac
ggaagtgtggagccgatgaagatcatcactgtgcgtacctttacaaccccgagcagcttc
gctgccaggcagagccgcatccgcaaccctagtttctacaagagggagcatcgagctgtg
gatacgagcgacctgggggtgatgctagaggagatgccagtgtgggaggaagttcaggct
tctctgctgtgctccctggagaaggagcaaaggggtcacctcattgcagagagcaaatgc
acggatgctttgttacaagatgaaggcacacagacctacaacttcttgtctgctcctttc
cggagagaaacgtcgctggctgacctgaccgctgcaaaaccgttggagttgcacctacag
ctgcaggtggagagcgtcaccagccggcaccacaaggccagctcggccttcaccttcctc
tgtggacacaccttccagcgcagagaatatggcaaacattataagaacgtccacagtgac
atccagatgggcgtgaacgggtggttcgagcagaggtgccccctggcgtacctgggatgc
acctacagccagacgaggctgcagccctccactcatgaagccaccgtctcctacaacgag
gaccttggctgctttagcctgcatcccaccattcatgtttccttaagcgaagcttcccag
ccatccgggagctcagtggactcctccaccgctcagaggaggagaggaggtcgtggagga
ggaggggaggactctctgagctcgctgccctacgaggtgctgtgccacatggcccgtttc
ctggacagtctgtccctgtcccagctggctctggtgtcccagctgatgaggcaggtgagc
tcctctctgctgcaggagagagggatggtcaccctccgctgggagaagaagacctactca
cacggaggagccaaatggagggtgaagcacacggtttggcagttcagcactttgttctct
cctgtggacgattggtgcttccaaaacgtcccgtccatgtcggagcacctgaaggtgtgt
ccctgctatgagagagagtcccggacggagaagattcacctgccgcacgtcggaggagaa
acggcccagaccaagacaagctgtgaaggtcccactcttaccgcgttccagaagaagagg
atcgtgatgtag
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