Cyclopterus lumpus (lumpfish): 117742807
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Entry
117742807 CDS
T09199
Symbol
htr3a
Name
(RefSeq) 5-hydroxytryptamine receptor 3A
KO
K04819
5-hydroxytryptamine receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117742807 (htr3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117742807 (htr3a)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Serotonin (5-HT3)
117742807 (htr3a)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117742807
NCBI-ProteinID:
XP_034406336
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Position
14:4161813..4167269
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AA seq
492 aa
AA seq
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MRLSSAWSALIFLLIQGASRACTVKKLGGSSGRFANATLVRLSEFLSAGYKKGVRPVKDW
RTSTIVAIDLMVYSILNVDEKNQVLTTYVWYRQSWTDEFLVWDPEDFDEVKQVSIPTTNV
WVPDILINEFVDVGKSPDIPYVYVTHDGLVRNYKPIQVVTACTLNIYNFPFDVQKCSLTF
QSWLHTIDDINITLMRSPEELREDKSVFMNQGEWELLHILSNYKIFSVDNDDYYAEMKFH
VVIRRRPLFYTVNLLLPSIFLMVMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTL
PATAIGTPLIGVYFVVCMALLVISLTETVLIVRLVHKQDLQPPVPHWVKYLVLERAPALF
CIHKKHSLCPTLSSQGTDLEHYKDNNYGTAQCPLHHTCELGRRLSHHDREGRLLGLGLPP
SRDHAPPVMDNILHEVTAIRHFLEKRDRCREVAKEWLQVGYVLDVLLFRVYLVAVVAYSI
TLGTLWSVWQVA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtcatcagcctggagtgcactcatcttccttctgattcaaggagcatcaaga
gcctgcacagtgaagaaactgggcggcagctcgggacgattcgccaacgccacgttagtg
cggctgtctgagtttctgagcgcggggtataagaagggagtgagaccagtgaaggactgg
aggacgtccaccatcgtggccatagacctcatggtttactccatcctcaatgtggatgag
aagaaccaggtgttgacaacgtatgtatggtacagacagtcgtggacggatgagttcctg
gtgtgggacccggaggacttcgatgaagtcaaacaagtgtccatacccactacgaatgtg
tgggtgcccgacatcctcatcaacgagttcgtagatgtggggaagtctccggacataccg
tatgtgtatgtgacacacgatgggctggtgcgcaactacaagcccatccaggtggtcacg
gcctgcactctgaacatctacaactttccatttgacgtccagaaatgcagcctcaccttc
cagagctggctacataccatcgatgacatcaacatcaccctgatgcgaagccccgaggag
ctcagggaggacaagagcgtcttcatgaaccaaggcgagtgggagctgctccacatactg
tccaactacaagatcttcagcgtcgacaatgacgactactacgccgagatgaagttccat
gtggtgatccggcggcgtccgttgttctacaccgtgaacctgctgctgcccagtatcttc
ttgatggtgatggacatcgtgggtttctatctgccgccagacagcggcgagagggtttcc
ttcaagatcactctgctgctgggctactccgtcttcctcatcatcgtgtccgacactctt
cctgccacggccatcggaacccctctgataggtgtgtactttgtggtttgcatggccctg
ctggtgatcagcctgacagaaaccgtcctgattgtgcgtctggtccacaagcaggacctg
cagcccccggtgccccactgggtgaagtacttggtgctggagagagctccggccctcttc
tgcatccacaagaagcacagcctgtgccccactctgtcctcccagggcaccgacctggag
cactacaaggacaacaactacgggactgcccagtgccccctccaccacacctgcgagcta
ggccgaaggctcagccaccacgacagagaaggccggctgctcggcctgggcctgcccccg
tccagggaccacgccccgccggtcatggacaacatcctgcacgaggtgacggcgatacgc
cacttcctggagaagagggacaggtgccgggaggtcgccaaggagtggctgcaggtcggc
tacgtgctagacgtgctgctcttcagggtctacttggtggccgtggtggcctacagcatc
acgctgggcacgctgtggtccgtgtggcaggtcgcatga
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