Cyclopterus lumpus (lumpfish): 117742817
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Entry
117742817 CDS
T09199
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117742817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117742817
04090 CD molecules [BR:
clum04090
]
117742817
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
Nectin family
117742817
CD molecules [BR:
clum04090
]
Proteins
117742817
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
Ig_2
C2-set_3
C2-set_2
C1-set
Amnionless
Motif
Other DBs
NCBI-GeneID:
117742817
NCBI-ProteinID:
XP_034406350
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All DBs
Position
14:21704360..21711205
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AA seq
470 aa
AA seq
DB search
MSWKVPLESTNRSRDEEAQQSRSVTVCEMEVKLQLSVFVLLIQVSLAVWQRVTVRKGQTL
SLSCPITDAHINHVDWRNPEGYVMFFNNQEVLKDKRYSINKLSLSEFTISISDITFKDGG
IYTCSQYDAHTTEKKVEVTVLGRPKMEVAKNEGTFVIKCTAEGNHYPPQISWKLDNGPEI
IAHGQEEVRKYDDKKYVTMEMLQVRSVENRITVKCLVRHPALYSRPLMNFVQIGPDSTKP
WGTTTTSSPSTQPRGSTEVPGTTTVFKHGRTTVYLATRGSKGPSSESSITTVTAPSGRPL
VPVKSTGSHLSTDGLQDWTSVSETTEDITSNNRTQNQTGSFNDSKMRTGTGGSSSLLVFL
VTCLIFGLLVVVIFFAIKLRRAHIAWKRVFIVTENEDTDPSEESSKSKSSQEERNAQGQR
RRGLFNTAFTKYVVEKPAAISSVINTNAMAAAEIDKDQPSQPQTLQPSVT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggaaggtccctctggagagtacaaatagatcgagagatgaggaagcgcagcag
agtcgaagtgtgactgtctgtgagatggaagtgaagctgcagctcagtgtcttcgtgtta
ctcatccaggtttcacttgcggtgtggcagcgtgtgactgtaagaaaaggtcagacgctc
agcttaagctgcccaataactgacgctcacatcaaccatgtcgactggaggaaccctgaa
ggatatgttatgttcttcaacaaccaagaagttttaaaggacaagcgctacagcatcaac
aaactgtctctgtcggaattcaccatcagtatttccgacatcaccttcaaagatggaggc
atctacacatgctctcagtatgacgctcacacaacagagaagaaagtggaggtgacagtg
ttaggccgtcccaaaatggaagtagcaaagaatgaaggaacgtttgtcataaaatgcact
gctgaggggaaccactatcctccccagatctcctggaaattggataatggacctgaaatt
attgctcatggccaagaagaagttagaaaatatgacgacaagaaatatgtcacaatggaa
atgctacaagtacgctcagtggagaacaggatcactgtcaaatgccttgttcgccatcca
gctctgtactcacgtcctctgatgaactttgtccaaattggaccagactcaacaaagccc
tggggcacaaccacgaccagttcccccagcacccagcctagagggtcaacagaggtgcca
ggaacaacaaccgtcttcaaacacgggagaacaactgtgtaccttgcaaccagaggctca
aaggggccttcatcagagagctcaataacgacggtcacagcacccagtggacgtcctctg
gtccctgtaaaatccacaggctcacatctcagcacagacggcctacaagactggacgtct
gtctctgagacaacagaagacatcacatccaataacaggacacaaaaccaaacagggagc
tttaatgactcaaagatgcggacaggaaccggaggaagttcatcattactggtcttcctg
gtcacatgcctgatcttcggtctactggtggttgtcattttctttgccatcaagctgagg
agagcgcacatcgcctggaagagagtttttattgttacagagaatgaggatactgatcca
tcagaggagagcagtaaatcaaaatcaagccaagaagagaggaatgcccaaggacagagg
cgaagagggctcttcaacacggcattcacaaagtacgtcgttgaaaaaccagcagcgata
agctcagtgataaacacaaatgcgatggcagcagcagagatagataaagatcagccttct
caacctcaaacccttcagccaagtgtgacataa
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