KEGG   Cyclopterus lumpus (lumpfish): 117742852
Entry
117742852         CDS       T09199                                 
Symbol
vtnb
Name
(RefSeq) vitronectin b
  KO
K06251  vitronectin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117742852 (vtnb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117742852 (vtnb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117742852 (vtnb)
   00536 Glycosaminoglycan binding proteins [BR:clum00536]
    117742852 (vtnb)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117742852 (vtnb)
Glycosaminoglycan binding proteins [BR:clum00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   117742852 (vtnb)
SSDB
Motif
Pfam: Hemopexin Somatomedin_B PBP1_TM PGC7_Stella
Other DBs
NCBI-GeneID: 117742852
NCBI-ProteinID: XP_034406393
Ensembl: ENSCLMG00005014044
LinkDB
Position
14:13512376..13515712
AA seq 443 aa
MKPAVALLGLVLLLDITSAAEQSCVGRCGSFDPQTKCQCDSICVYYGSCCGDFDTICPKK
TARGDTFQEAEEVTDRTTLQPTFNTVAPTQTASPTPVTTQEPAPPASVEPDAAACSGRPF
DAFLQLKNGSIYAFRGEYFFELDDKSVLPGYPKLIQDVWGISGPVDAAFTRINCHGKSYI
FKGKKYWRFDGDVLDENYPRDISAGFDGIPDDADASFAIPAPSHLGKEKAYFFKGNKYYQ
YEFKHQPSHEECVRMSRTSPSVLFTRYTDLFCDQTWEDFFTDLFGSSYSSHQTGPRFTSR
DWQGVRPSVDAAMVGRVYLSPKPTPAAPPPARRPSSRRRRPSKKRAQRRRQSRQTLFDDL
WGYDDLFGYDYSDYTDIFDEIPTEYKSTPLQNVYFFKKDKYYRVDLQTKRVDSANPPYPR
SIAKYWLGCKHEETPDASRAEKR
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaagccagcagtggctctgctgggcctcgtcctgctgctcgacatcacctctgctgca
gaacagtcctgtgtgggtcgctgtggctccttcgacccgcagacaaaatgccagtgtgac
tccatttgtgtgtactatgggagctgctgcggggactttgataccatctgccctaaaaaa
actgctcgtggcgataccttccaggaagcagaagaagtaacagacagaacaactctccaa
ccaactttcaacacggttgcaccgacccaaactgcctctcccacacccgtcaccacacaa
gagcctgctcctcctgcttctgtcgagcctgacgcagcggcctgcagtggtcgacctttt
gatgcttttctgcagctgaagaatggctcgatatatgcttttagaggtgaatatttcttt
gagttggatgacaagtccgtacttcctggttacccaaaactcatccaggatgtgtggggg
atctctggacccgtagacgcggcattcacacgcatcaactgccacggaaaatcctatatc
tttaaggggaaaaagtactggaggtttgacggtgatgttctggatgagaactatccgcgg
gacatttcagccggctttgatggcataccggatgacgctgacgcctctttcgccataccg
gcaccaagtcaccttggcaaagagaaagcctactttttcaaagggaacaagtattaccag
tatgagttcaagcaccagccttcccatgaggagtgcgtccgcatgagcagaacctccccc
tctgtgctgttcactcgatacacggacctcttctgcgatcagacatgggaggacttcttc
accgacctctttggaagctcctacagcagtcaccaaacaggccctcgcttcaccagcagg
gactggcagggcgtcaggccatctgtagacgctgccatggtgggacgagtctacctcagc
cccaaacccacgccagcggctcctccaccagcgagaaggcccagcagtcggaggaggagg
cccagcaagaagcgtgcacagcggagaaggcagagtcgccaaacgttgtttgatgatttg
tggggttatgatgatctgttcggttatgactacagcgactacaccgacatctttgatgag
atccccacagagtacaaaagcacccccctgcaaaatgtgtattttttcaagaaagataaa
tactacagagtggatctgcagacaaaacgtgtggactctgccaaccctccttacccacga
tccattgcaaaatactggctgggctgcaagcatgaagagacacctgatgcatcaagggca
gagaagagatag

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