Cyclopterus lumpus (lumpfish): 117742852
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Entry
117742852 CDS
T09199
Symbol
vtnb
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117742852 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117742852 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117742852 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117742852 (vtnb)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117742852 (vtnb)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117742852 (vtnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
PBP1_TM
PGC7_Stella
Motif
Other DBs
NCBI-GeneID:
117742852
NCBI-ProteinID:
XP_034406393
Ensembl:
ENSCLMG00005014044
LinkDB
All DBs
Position
14:13512376..13515712
Genome browser
AA seq
443 aa
AA seq
DB search
MKPAVALLGLVLLLDITSAAEQSCVGRCGSFDPQTKCQCDSICVYYGSCCGDFDTICPKK
TARGDTFQEAEEVTDRTTLQPTFNTVAPTQTASPTPVTTQEPAPPASVEPDAAACSGRPF
DAFLQLKNGSIYAFRGEYFFELDDKSVLPGYPKLIQDVWGISGPVDAAFTRINCHGKSYI
FKGKKYWRFDGDVLDENYPRDISAGFDGIPDDADASFAIPAPSHLGKEKAYFFKGNKYYQ
YEFKHQPSHEECVRMSRTSPSVLFTRYTDLFCDQTWEDFFTDLFGSSYSSHQTGPRFTSR
DWQGVRPSVDAAMVGRVYLSPKPTPAAPPPARRPSSRRRRPSKKRAQRRRQSRQTLFDDL
WGYDDLFGYDYSDYTDIFDEIPTEYKSTPLQNVYFFKKDKYYRVDLQTKRVDSANPPYPR
SIAKYWLGCKHEETPDASRAEKR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagcagtggctctgctgggcctcgtcctgctgctcgacatcacctctgctgca
gaacagtcctgtgtgggtcgctgtggctccttcgacccgcagacaaaatgccagtgtgac
tccatttgtgtgtactatgggagctgctgcggggactttgataccatctgccctaaaaaa
actgctcgtggcgataccttccaggaagcagaagaagtaacagacagaacaactctccaa
ccaactttcaacacggttgcaccgacccaaactgcctctcccacacccgtcaccacacaa
gagcctgctcctcctgcttctgtcgagcctgacgcagcggcctgcagtggtcgacctttt
gatgcttttctgcagctgaagaatggctcgatatatgcttttagaggtgaatatttcttt
gagttggatgacaagtccgtacttcctggttacccaaaactcatccaggatgtgtggggg
atctctggacccgtagacgcggcattcacacgcatcaactgccacggaaaatcctatatc
tttaaggggaaaaagtactggaggtttgacggtgatgttctggatgagaactatccgcgg
gacatttcagccggctttgatggcataccggatgacgctgacgcctctttcgccataccg
gcaccaagtcaccttggcaaagagaaagcctactttttcaaagggaacaagtattaccag
tatgagttcaagcaccagccttcccatgaggagtgcgtccgcatgagcagaacctccccc
tctgtgctgttcactcgatacacggacctcttctgcgatcagacatgggaggacttcttc
accgacctctttggaagctcctacagcagtcaccaaacaggccctcgcttcaccagcagg
gactggcagggcgtcaggccatctgtagacgctgccatggtgggacgagtctacctcagc
cccaaacccacgccagcggctcctccaccagcgagaaggcccagcagtcggaggaggagg
cccagcaagaagcgtgcacagcggagaaggcagagtcgccaaacgttgtttgatgatttg
tggggttatgatgatctgttcggttatgactacagcgactacaccgacatctttgatgag
atccccacagagtacaaaagcacccccctgcaaaatgtgtattttttcaagaaagataaa
tactacagagtggatctgcagacaaaacgtgtggactctgccaaccctccttacccacga
tccattgcaaaatactggctgggctgcaagcatgaagagacacctgatgcatcaagggca
gagaagagatag
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