Cyclopterus lumpus (lumpfish): 117742865
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Entry
117742865 CDS
T09199
Symbol
pigs
Name
(RefSeq) LOW QUALITY PROTEIN: GPI transamidase component PIG-S
KO
K05291
GPI-anchor transamidase subunit S
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
117742865 (pigs)
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GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
117742865
NCBI-ProteinID:
XP_034406406
Ensembl:
ENSCLMG00005009858
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Position
14:complement(10758299..10762871)
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AA seq
582 aa
AA seq
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MTFDWMHPYNKRXPFSSATEMATTEVERRRGQLAALSIAAVVIIVGVPLWWRTTETYRAW
LPVSQINELSNLQLQLSAEVEVVFARGTVTPEQQKKVPLTQIQDEEHTVDEDTALRYRYE
TKYRTATIMEEDALNQPTAAEADLSLHTLSESPCGSLVVYVIPESSSLLPEDMDVYVGQR
RTALLRIGAQMRVGKTLDQLLAHLEPRIKQVLQVMSFSHTDISAALSDRVRLSPGNKESI
ADSMRTFKSSPGYEITFSLLNPDPKSHRLHWDIEGAVQTYIQPLLTKLASVANFSIDSQT
LYYAMLGVNPRFDSSLSAYTLHSDSLAHVINPVEARLGSNAASSNPVLNFLLYVPDAHHS
PLYIHDRKKQEVPSNAFHSPRWGGIMVYNVNGFYGPEAVFPVDVNINMAKVMGVFLAQLR
LLLGVQSSTAPSGFLVAPCGSNGLADWELDRLMWSRSVENVATATTTITSLAQLLEQIGN
IVINDNIAEQVSSAVTSLQLAVAELETGNLRFALQYSKEAILASERAFFDPSLLHLLYFP
DDQKFAIYIPLFLPMCVPILLSLLKIVSDARQKRREKQAKKD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgactggatgcatccatataacaaacgcnacccattcagttcagcgacagaa
atggctaccacggaagtggagcgcagacgaggccagctggctgctctgtccatagcagca
gtggtcatcatcgtgggagtccctctgtggtggcgaacaactgaaacgtaccgcgcctgg
ttgcctgtcagtcagataaatgagttgtctaatctgcagctacagttgagtgctgaggtg
gaggttgtgtttgcacgtggaacggtgacaccagaacagcagaagaaggtcccactgaca
cagatacaggatgaggaacacaccgtagatgaggacacagctttgaggtacaggtatgag
acaaagtaccgcacagctacaatcatggaggaggatgccctgaaccagcccactgctgca
gaggcagatctatctctgcacacactcagtgagagtccgtgtggctctttggttgtgtat
gtgatcccagagtcatcttcactgctgcctgaggatatggacgtgtatgtcggacagcgt
cgaacagccctgctgcgtatcggtgcccagatgagagtgggcaagacactagatcaatta
ctggctcatctggagcctcggatcaagcaggtgttgcaggtgatgtcttttagccacacc
gacatcagtgcagccctcagcgacagagtccgtctcagccctggcaacaaagagagcatc
gctgacagtatgagaacctttaagtccagcccaggttatgagataacattcagtctgctg
aaccctgacccaaagtcacaccggctacactgggacatagagggtgctgtgcagacctac
atccaacctttgcttacaaaactggcgtctgtggccaactttagcattgactctcagacc
ttatactatgccatgctcggtgtcaacccgcgctttgacagcagcctcagtgcctacaca
ctccactctgacagccttgcacatgtgatcaaccctgtggaggctagactgggctcaaac
gctgcatcttccaacccggtgttgaattttcttctctacgtcccggatgctcaccattca
cccctttacattcacgaccgcaagaaacaggaagtgccctctaatgcgtttcactctcca
cgttggggtggaattatggtctataacgtgaatggtttctatggaccagaggctgtattc
cctgttgatgtcaacatcaacatggccaaagtcatgggagtctttcttgcacagcttcga
ctgttgctgggtgtccagtcttctactgctccctctggcttcctggtggcaccatgcggc
agtaacgggctagctgattgggagctggaccgtctcatgtggagtcggagtgtggaaaat
gttgcaacagcaaccacaaccatcacatcactggcacagctgttggaacaaataggcaac
attgttatcaatgacaacattgctgaacaggtgtctagtgctgtcacgtctcttcagctg
gctgtggctgagttggagaccgggaacctccgctttgctctgcagtacagtaaagaggct
atcctggcatcagaaagggcattctttgacccttccctcctccatctcctctacttccct
gatgaccagaagtttgccatctacataccactctttctgccaatgtgcgtgcctattctt
ctgtcactgcttaaaatagtgtctgacgctcgccagaaacgcagagagaagcaagccaaa
aaggactga
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