Cyclopterus lumpus (lumpfish): 117742881
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Entry
117742881 CDS
T09199
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117742881
Cell adhesion molecules [BR:
clum04515
]
Cadherins
Protocadherins
117742881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
ECSCR
SRTM1
Motif
Other DBs
NCBI-GeneID:
117742881
NCBI-ProteinID:
XP_034406420
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All DBs
Position
14:complement(16141898..16146260)
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AA seq
991 aa
AA seq
DB search
MDRLFGKWHGVCRFALFTCFLDAVRGQIRYSIPEELEHGAFVGNIAEDLGLDLDKLSARR
FRIVSGAKKQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIESPLELYRVEMEI
LDVNDNSPSFPWTEFNLDISESAAPGSRFPLESAQDLDVGPNSLRTYLLSVNEHFLLDIQ
TRSDGSKFAELVLQNSLDREQQSAHQMVLTAVDGGAPERSGTAQIDITVLDANDNAPVFD
QSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRQLFSVDSRTGEIK
VKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDTNDNLPEVILTSVSTPVQEDA
PPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTSDFLDREAVADYNI
TLTARDMGSPPLFTRKTILVQVSDVNDNAPRFKQPSYTVYLTENNAPGASICSVTALDPD
YGQNAYLSYSIVEGDIQGMHVSTYVSINSDNGNIYALRSFDHEQLKHFQVTVRAQDAGFP
PLSSNVSVNIFILDQNDNAPVIVSPVARNGSAPSGTVPRSVDAGYLVAKISAADADEGQN
SRLFYQLLQATDPSLFSIALYTGEIRTMRPFAEKDATRHRLVILVKDNGQPPLSATVSII
LSVVDSLPDSKPDLGDLSLSPHHSSNFTLYLIVSLGAISFTFLVAIIVLVAVRRLKGRAS
GGESDFPSVGGSCGSCCCCCCSRSETSTTTEVFKKSNLNVRMSAGAPGCAETNGNGALPQ
VYCYKMCLTPESSKSDFMFLKPCSPVMSVQQNNAKSTDYLTSGWSTLDRNELGNNRAATP
NELKYSNKDWTWTKNQRNSAYKRYSSANMEGTLTRQQKSDDHGFSCSVAPQYWTWGNHMN
DCQISLQEGAVPHYSWTPKYTQPHSEQPDYQHNVYIPGTTSDYSTLKLAPRGDLDVYNTF
STFGKKKRFISNYEQSFDNDDSLIVSNDIFK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggacagactgtttgggaaatggcacggagtttgccgttttgcgttgttcacttgcttt
ttggatgcagtccggggacagatccgctactccatcccggaggaactggagcatggagcg
tttgttggcaacattgcagaggacctgggcttggatttggacaaactctctgcgcgcaga
ttccggatagtctcgggtgccaagaagcaatatgtggaggtaaatttagaaaatggagtt
ctcttcgtcaacgagagaattgaccgtgaggaactgtgcgagcagagtttgtcctgctct
tttcacctgcaagtggtcatcgaaagccctctggagctgtacagggtagagatggaaatt
ctggacgtgaacgacaactctcccagtttcccgtggaccgagttcaatctggacatatcg
gagtccgccgcgccagggtcccgcttcccacttgagagcgcacaggacttagacgtcggc
cccaactcgctgcgcacctacttgctgagtgtgaacgagcacttccttttggatatacag
acgcgcagcgatggcagtaaatttgcagaactagtcctacagaactcactggaccgagag
cagcaaagtgcgcaccaaatggtcctaacggcggtggatggaggcgcaccggagagatcc
ggcactgcgcaaatcgatatcacggttttggatgcaaatgacaacgcgcccgtgtttgac
cagtcgttttacagagtcaggctggcggaaaacgcacccaaaggcacagttgtcataaaa
ctcaacgcgtccgatttagacgagggtcctaatgcggacatcacctattcattcagcggc
cacgcgcccatcaaagtgcgccagcttttcagcgtggactcgcgcacgggggaaatcaaa
gtcaaaggagtgatagattacgaaaaggccaggatgcatgagatttatgtgcaggcgaaa
gataaagggccctccgctgtggcagtgcactgcaaagtgctggtgaacgtgttggataca
aatgacaacctcccggaggtgatcctcacgtcggtgtctacacctgtgcaggaggacgcg
cccccgggcacggtgatagccgtcatcagcgtgatggacaaggactcgggtgaaaacggg
aacgtggactgcgagatcccacaccacgtcccattccagctccactcatcctttaagaac
tactacactttagtaacttcagattttctggacagagaggcagtcgcagactacaacata
accctcaccgcccgagacatgggctccccacctttattcacgaggaagaccattttggtc
caagtgtctgatgtgaacgataacgcgccccgcttcaagcagccctcctatacggtgtat
ctgaccgagaacaatgcaccgggggcatccatttgctcggtgaccgcactggacccagat
tatggtcaaaatgcatacctctcctattctatagtggagggtgacatacaggggatgcac
gtgtccacgtacgtgtccataaactcagacaacggaaacatttacgcgctgcgatccttt
gaccacgaacaacttaaacacttccaggtcaccgtccgagctcaagacgccgggttccca
cctctgagcagcaacgtctccgtgaacatctttattttggaccaaaacgacaacgcgccc
gtgatcgtgtcccctgttgcgcgaaacggcagcgcgcccagcggaacggtgccccggtcc
gtggacgccggttacctcgtcgccaagatcagcgcggcggacgcggacgagggtcaaaac
tcgcgtctgttttatcagctgctgcaagcaacggacccgagcttgttcagcatcgctctg
tacacgggagaaatcaggacgatgcgcccgtttgcggagaaagacgccacgaggcacaga
ttggtcattcttgtgaaggacaatggtcagccgcccctctcggccactgtttccatcatc
ctgtcagtggttgacagcctgccagattccaagcccgatttgggagacctgtcactaagc
ccacatcacagctccaacttcaccctgtacttaatcgtgtctctgggcgccatctccttc
acatttctcgtggctatcattgtcctggttgctgtgcgcagactgaagggcagagcgtcc
ggcggagagtctgacttcccctcggtcggcggaagctgcgggagctgctgctgctgctgc
tgctctcgctcggagacctccaccaccacagaggtgttcaagaagtccaacttgaacgtc
cggatgtccgcaggcgcgcccggctgcgcggagacaaacggcaacggcgctctgccgcag
gtctactgctacaaaatgtgtctgacaccggaatcgtccaaaagtgacttcatgtttctg
aagccttgcagtccggtgatgtcagttcagcagaacaacgccaagagcaccgattacctc
acttctggctggagcacactggaccgcaatgaactgggcaacaacagagcggcgacccca
aacgagcttaagtattcaaacaaggactggacctggaccaagaaccaacgcaactcagca
tacaagaggtacagttcagcaaacatggagggcactctcactcgccaacaaaagtccgac
gaccatgggttttcctgctctgtggcaccacagtactggacctgggggaaccacatgaat
gactgccagatatctcttcaagagggagcagtccctcactactcgtggacccccaagtac
actcagcctcactctgaacaaccagactaccagcacaacgtctacatacctggcaccacg
tctgactacagcactctgaagctggcacccagaggagatctggatgtgtacaacacgttc
tctacttttggaaagaaaaagagattcatctcaaactatgaacaatcttttgacaacgat
gatagtctcatcgtcagtaacgacatcttcaaatga
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