Cyclopterus lumpus (lumpfish): 117742901
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Entry
117742901 CDS
T09199
Symbol
igsf5a
Name
(RefSeq) immunoglobulin superfamily member 5
KO
K06786
junctional adhesion molecule 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04517
IgSF CAM signaling
clum04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117742901 (igsf5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117742901 (igsf5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117742901 (igsf5a)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
CTX family
117742901 (igsf5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
I-set
Ig_3
C2-set_3
C1-set
TED6
Orthoreo_P10
EphA2_TM
Ig_2
Prominin
MpPF26
Tcell_CD4_C
PRIMA1
DUF6336
Motif
Other DBs
NCBI-GeneID:
117742901
NCBI-ProteinID:
XP_034406443
LinkDB
All DBs
Position
14:20153003..20159831
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AA seq
378 aa
AA seq
DB search
MGWKQASHPSHMLYYSLTGRPKDNNTSMTVPWKSRPDLFRIGFLLCATGALSGQFQLEPL
NSTVLQGSDARFNATVQGKWTIMTWGVGGFMVLNFPITGNVTSSSEQFSAKFCFSGDTSC
VEFTIHNVTRSAEAGPVVCRVLGDYGSKTAQLNVEESGMVNIKGGNVTVVQDQQVEFQCV
TSAWFPTATVSWTRNGQAVNSSLYNTSSMVDGETFNSTSVLRFQAVSNATVECRATVLSL
TSPQSSSVFLVVVPKPPDWTVLIAVVVSIGGFALLVLLIIGIIFCCKCREKKQRNYQDEM
RARTDSEISGGQENAGYVSEDQTSVAPSKLTDSGFSQASGSEVHEVAVNTNQAGHVYSGA
PITVGESGVRKHRHVTIV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaaacaagcctcacaccccagccacatgctttattactcactgacaggtaga
ccgaaggacaacaacactagcatgactgttccctggaaatcaaggcccgacctcttccgc
atcgggttcttactgtgtgcaactggagcgttgtcgggacagttccagctcgagccgctg
aattcaacagtgctccaaggctctgatgcgcgattcaacgccactgtgcaaggaaaatgg
acgatcatgacctggggagtcggagggttcatggtcctcaatttcccgatcaccggtaac
gtaacctcgtcctcagagcagttctccgccaagttctgcttcagtggtgacaccagttgt
gtggagttcaccatccataacgtcacccgcagtgctgaggccggcccggtcgtttgcagg
gtgctgggggattatggatcaaagacggcacagctaaacgtggaagagagcggtatggtc
aacatcaagggggggaatgtaacggtggtgcaggaccagcaggtggagttccagtgtgta
acatccgcttggttccccaccgctactgtcagctggacccgaaacggccaagctgtgaac
agcagcctgtacaacaccagcagcatggtcgatggggagaccttcaactccaccagcgtc
ctgaggttccaggctgtcagcaacgccacggtggagtgtcgggcgactgtgctgtcactc
acgagcccgcaatccagctccgtcttcctggtcgttgttcccaagcctcctgactggacc
gtgctgatagctgtggtcgtgtccatcggaggtttcgctctgctggttttgctcatcatc
ggaatcatcttctgctgcaagtgcagggaaaaaaagcaacgcaactaccaggatgagatg
agagcgaggacggacagcgagataagcggtggtcaagagaatgcaggatacgtgtcggag
gatcaaaccagtgtcgctcccagcaaacttactgacagcggcttttctcaggcaagcggc
tccgaagttcatgaggtggctgtgaacactaaccaggcaggacatgtctacagtggtgcc
cccatcactgtgggtgaatccggagtcaggaaacacagacatgtcaccattgtgtaa
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