Cyclopterus lumpus (lumpfish): 117742906
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Entry
117742906 CDS
T09199
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04517
IgSF CAM signaling
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117742906 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117742906 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clum04812
]
117742906 (sptbn4a)
Cytoskeleton proteins [BR:
clum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117742906 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
117742906 (sptbn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
117742906
NCBI-ProteinID:
XP_034406447
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All DBs
Position
14
Genome browser
AA seq
1261 aa
AA seq
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MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRPVVQQK
LEEIRECWSDLESTTKAKARQLFENNKPEPAVKSYSDLDNQLSHLEQQPPQLEQVHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGLMAGDREGGEQSGVVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPLASCKDYGTNLQSVQQHVKKNQTLQ
RELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAGHVRQLWEVLQLETERRCVMLDATL
QAQQYYSEAAKVESWLSGQKLHLVNEERGTDEASTLQLLKAHLALEQTVETYAETVGMLS
QQCQRLMELGHPESVQLTKQQSHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKDVEELEK
WITDRETVASSTELGHDLEDVTVLQERFTKFASETNSVGQQRMEQVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELMETRRQMLVASHQLHKFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMLKEMEVM
EAWKELLGSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLTALGVMMK
QHQDLKVKVDGRSKTIQQCADLGKILIAAGNPASEEIQEKLDSLLAKQRDLVEKWDKHQE
KLQRKQEKFQFAQETVRAEAWLKAKEPLITSREPEGGGARAQTDEVEQLILRHEAFRKAA
VTWKERFSSLRQLSAASLDLGATPASQRLSSTLASYKPVINGSGYHGMEQQSSGKLHLKA
DFMQPRINHIHKAVNPLLEASRVQREQFGDIPMADMVGPESGLELLHGRLQRDPRGSRSD
PQMDHLRRERECKLGRQTSSEQEIQARLNELPLIVRQERYRRRLERQSSSEQEGSSKQRL
QRQDSSDLEGSVKEGSDKRSGDIRSTMAEIVEQVQEREAAQARGEPYRPTSSLSAPVTRF
DGRPRARDRPKPRRRPRPKEPEDTRRSRSAPATGAPTTPQPPSHTAQNEGFLYRKKATTS
DLEAQQRSPNSKSWMNVYCVLKEGQLTFYKDARHLTTTYNEESPVDLCNCSFDPSMGYKK
KKNVFILQMNDGINLAFHAKDEEDLKAWTSNITTCIAEHESMGKWDKPGTSSMDPDNSER
KEKSEGDADARSERSELAEGEERSEKERSEKGDGSEKLDTSEIADKMEGGAGGSSTSGKS
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacacggcgcgggacgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcggaactggcccgcaataaggaatggcttgccaagatcgag
caggagggtcaggagctgattcaggagaagccggagctccgtccagttgttcagcagaag
ctggaggagatcagagagtgctggtccgacctggagagcacgaccaaggccaaggcccgc
caactcttcgaaaacaacaagcccgagccggcggtgaagagctactcagacctggacaac
cagctctcccacctggagcagcagcccccccagttggagcaggtgcaccatctgcccaca
ttcaacgagcagctacagaaattccaggctatggagtctcagattggggacttttacaag
gatgtgggagagctgggtagcttgcagggggtctgccttccccagcgagggctgatggca
ggtgacagggaaggcggcgagcagtcgggcgtggtggagacccgaatcgtccgcctcatt
gagccgctgaaggagagacgccgcatcctgctggcttccaaagagatgcatcaggtcgcc
caggacctggaggacgagatactgtggattcaggagaggcttcccttggcctcctgtaag
gattatgggactaacctccagagtgtacagcagcatgtaaaaaagaaccagacacttcag
agggagctgacaggacggcgggctcgtgtcgaggaggttctggaccgtgcggggatcatc
gcttcactgaggactcccgaggtggagtttgtgcgcgaaggggccgggcacgtgcgccag
ctgtgggaggttttgcagctggagacggagcggcgctgcgtgatgctggacgccacactg
caggctcagcagtactacagcgaggcggctaaagtggagtcctggctgtctggtcagaag
ctccatctggtcaacgaagagagaggcacggacgaggcaagcaccctgcagctgctgaag
gcccacctggctctggagcaaacagtggaaacatacgcagagacagtaggcatgctatcc
cagcagtgccagcgtctaatggaactcggacacccagaaagcgtgcagctcaccaagcag
cagtcgcacatagaccggctgtatgtgtctctgaaggacatggtggagcacaggaagacc
aagctggagcagcaatactggctctatcagctcaacaaggacgtggaggagttagagaag
tggatcactgaccgggagacggtggccagttccactgagctgggccacgacctcgaggac
gtcacggtgcttcaggagaggttcaccaagtttgcctcggaaaccaacagcgttggccag
cagcgcatggagcaggtgaacaaaatggtgaacgagatgattgactgcggccattcggac
gcggccaccattgccgagtggaaggatggtctgaacgagtcatgggccgacctcctggag
ctgatggagacccgcaggcagatgctggtggcgtcgcaccagctgcacaagttcttcact
gactgcaaagaggtcttggctcagatcgcggggaagatgaagcagctgccagaggtgagg
gcgtgccaagccaacatcaccaatccggccaccctgcagagactcatgcactccttcgag
catgcccttcaattgctcgtcgcacaggtgaggcagctgcaggagaacgcggcccagttg
aggaccatctatgctggtgagaaggccgaggccatcatgctcaaagagatggaggtgatg
gaagcctggaaggagctgctgggctcttgcgaggccagtcgcgtccaggtcacttcggtg
acggacaaggtgcagttcttctcagtggtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagattggatgggatgagcccagggatttgacggctctcggggtgatgatgaaa
caacatcaggatctgaaagtcaaagtagacggccgcagcaagaccatacagcagtgtgca
gatctgggcaagatccttatagctgccggcaaccctgcatcagaggagatacaagagaag
ctggacagtcttctggctaagcagagggaccttgttgagaaatgggacaaacaccaggag
aagttacagcgcaagcaggaaaagttccagtttgcccaggagacggtaagggcggaagcc
tggctgaaggccaaggagccgctgatcacctccagagagccagagggaggaggggctcgg
gcccaaacagacgaggttgagcaactcatccttcgccacgaggccttccgcaaggctgct
gtaacctggaaagaacgcttcagctctctccgccagctttccgcagccagtctggatctt
ggtgccacccctgcaagccagagattgtcctcaaccctagccagctacaagccagttata
aatggatcaggctaccacggaatggaacagcagagcagtgggaagttgcacctgaaagct
gacttcatgcagcccagaatcaaccacatccacaaggctgtaaacccactccttgaggcc
agcagagtgcagcgggaacagtttggggacatcccaatggcagacatggtggggccagag
tcagggctggagctcctccacggccgtctccagagggatccccgtggcagccgctctgat
cctcagatggaccatctgaggcgagagagggagtgcaagctgggtagacagacctccagc
gaacaggagatccaggccaggctgaacgagttgccactgattgtgcgtcaggagcgctac
cggaggcgcctggagaggcagtcgtccagcgaacaggaggggagcagcaagcagaggcta
cagagacaggactcgagtgaccttgagggctcggttaaggaaggctctgacaaacgctca
ggggacatcagatctaccatggcagagattgtagaacaggtccaggagagagaggcagca
caggcacgaggagagccttatcgaccaacaagcagcctctcagcacccgtgactcgtttt
gacggacgccctcgtgcacgagaccgccccaaaccgagaaggaggccccgtccaaaagaa
cctgaggacacaagacgttctcgctcagctccagctactggtgcaccaacgacacctcaa
ccgccttcacacactgcccaaaacgaaggcttcctctaccgcaaaaaggccaccacttct
gaccttgaagctcagcagagaagcccaaacagcaagtcctggatgaacgtatattgtgtg
ctgaaagagggacagctgaccttctacaaggatgctaggcaccttaccacaacatacaac
gaggagtcccctgttgacctttgtaactgctcgtttgatccttcaatgggatacaaaaag
aagaaaaatgtcttcattcttcagatgaatgatggaatcaacttggcattccatgcaaag
gatgaggaggacctgaaggcctggacttcaaacatcaccacctgtatagctgagcatgag
tccatgggcaagtgggacaagccgggcacctcgtccatggatcccgacaactcggagaga
aaggagaagtcagagggggacgcggacgccaggtcagagaggtctgagctggctgaaggg
gaggagcggtctgagaaggagaggtcagagaaaggggacggctccgagaagttagacacg
tcagaaattgctgacaaaatggagggcggggcggggggctccagcacatctgggaagagc
aaatga
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