KEGG   Cyclopterus lumpus (lumpfish): 117742924
Entry
117742924         CDS       T09199                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117742924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clum03041]
    117742924
Spliceosome [BR:clum03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117742924
 Complex B
    117742924
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 117742924
NCBI-ProteinID: XP_034406474
Ensembl: ENSCLMG00005015124
LinkDB
Position
2:complement(11073394..11079334)
AA seq 234 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFAEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNAQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRDLYGRRRKRNRSGSRSRERRSRSRERPPPPPPRRERDRPRRSGDRERSGRF
NT seq 705 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcgtccattttcggcacagagaaagacaaggtgaactgctccttt
tattttaaaattggcgcttgcagacatggagaccgctgctcaagattgcacaacaaacca
accttcagccagaccatcttgattcagaacatctaccgtaatccccagaacagtgcacag
acggccgacgcttcacgctgtgccgtcagcgatgtggaaatgcaggagcactacgacgaa
ttctttgaggaggtgttcgctgagatggaggagaagtatggcgaggtggaggagatgaat
gtgtgcgacaacctgggcgaccacctcgtcggcaacgtctacgttaagttccgccgcgaa
gaggacgcagagaaagcagtcatggacctgaataaccgctggttcaatgcccagcccgtc
cactcggagctctcccccgtcacggactttagggaagcttgctgccgccagtatgaaatg
ggcgagtgtacccgaggtggcttctgcaacttcatgcacctgaaaccaatttcgcgggaa
cttcgaagggacttgtacggccggcgcaggaaaaggaaccgctcgggatcgcgttcccgg
gaaagacgctcccgctctagggaacgaccgccgccgccgccgccacggcgtgagcgcgac
aggccgagaaggtcgggggaccgagagcgctccggaaggttctga

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