Cyclopterus lumpus (lumpfish): 117742979
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Entry
117742979 CDS
T09199
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
clum01006
]
117742979 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117742979 (chm)
Prenyltransferases [BR:
clum01006
]
Protein prenylation
Rab geranylgeranyltransferase
117742979 (chm)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117742979 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
117742979 (chm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
117742979
NCBI-ProteinID:
XP_034406575
Ensembl:
ENSCLMG00005006515
UniProt:
A0A8C2X110
LinkDB
All DBs
Position
14:286840..312337
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AA seq
616 aa
AA seq
DB search
MATEDLPSEFDVVILGTGLAESVVAAAFSRVGQRVLHLDRRSYYAGHWASFTFNALLTWI
QQHHEEPQPEEVQDWSSLLEEGEELIPLSNSDSIRNLQVFCFTSEEDEEEESPNTTEEER
GGADEDAVRETSETESADSKDEETNQKTEEREEQAPQTKGEEPEADQPTPSAAQSQSEPT
KKKISYTQLLKEGRRFNIDLVSKLLFSRGSLVDLLIKSNVSRYAEFKNVTRILTYRHGQV
EQVPCSRADVFASRQLSVVEKRKLMRFLTSCVEETEEQRAYHGRPYLEFLCDQQLGDNLQ
HFLIHSIAMVTEDTPTEDGLAATRHFLRCMGRYGNTPFLFPVYGLGEIPQCFCRMCAVFG
GIYCLRHSVSCLLVDKETNRCKGVIDSRGHRISCSHFVVEEGFVGTDRKRLATPTRYLSR
AVLITDNSILPGNSDQQVSMVTVPPIAAGGPTVKMVELCPSTMTCMPGTYLVHLTCQSVG
SAFDDLSPVVTRMFRTPQSHDQVTGPSVLWCLYFNMADGSGLEVEGHDLPSNVFLCSGPD
GALGHEHAVRQAESIFLKILPEEDFCPPAPNPEDIIYDGETTSSTTGEEEKEEGERGEEE
KEKEVLEEKQSLQAEE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaagatcttccgtctgaatttgacgtcgtcattctgggcacaggtctggct
gagtcggtggtggcggcggcgttctccagagtcgggcagagggttctccacctcgacagg
cggagttattacgcaggtcactgggccagcttcaccttcaacgctctgctcacctggata
cagcagcaccatgaggagcctcagccagaagaggttcaggattggtccagcctgttggag
gaaggggaggagctgattcccctgtcaaactctgactccatcagaaacctgcaggtgttc
tgtttcaccagtgaggaagatgaagaggaggaatctccaaacaccacagaagaagagcga
ggaggagctgatgaagacgccgtcagagaaacgtctgagaccgaatctgcagattcaaag
gacgaagaaacaaaccagaaaacagaagaaagagaagaacaggccccccaaaccaagggg
gaggagccagaggcagaccagccaaccccctcggctgctcagagccaatcagagccgacc
aagaagaagatcagctacactcagctgctgaaggaaggacgcaggttcaacatcgacctg
gtctccaagctcttgttctctcgcggctcattggtcgacctgctcatcaaatcaaatgtc
agtcgctatgcagagttcaagaatgtcaccagaatactcacctatcgccacggacaggtg
gagcaggtcccttgtagcagagctgatgtgtttgctagtcgtcagctgtctgtggtcgaa
aaaaggaagttgatgcgttttctgacttcctgtgtggaggagacggaggagcagcgagcc
taccatggtcggccatatttggagttcctgtgtgaccagcagctcggcgacaacctgcag
cacttcctgattcactccatcgccatggtaacagaagacacgcccacagaggacggcctt
gccgccacgcgacacttcctgcgctgcatgggtcgctacggcaacacacccttcctattt
cctgtctacggcctcggagagataccccagtgtttctgtaggatgtgtgctgtgtttgga
ggaatctactgtctgagacactcagtcagctgtttgctggtggacaaggaaaccaacagg
tgtaagggggtgattgacagccgaggacaccgaatcagctgcagccattttgttgtggaa
gaaggctttgtggggactgatcgtaagcggctggccacacccaccaggtatctctccaga
gctgttctgataacagacaactccattctgcccggtaactctgaccaacaggtctctatg
gtaacggttcctccaatagcagcagggggtccgacggtgaagatggtggagctctgtccg
tccacgatgacctgcatgccgggaacatatctggtccacctcacctgtcagtcagttggc
tccgccttcgatgatctctcgccggtggttaccaggatgttccgcacgccacagtcacat
gaccaagtgacgggcccgtctgtcctctggtgtctgtacttcaacatggccgacggctcg
gggctggaggtcgaaggtcacgatcttccgtccaacgtgttcctgtgctccggacccgac
ggcgctctgggtcacgagcacgccgtcagacaggccgagtcgatcttcctgaagattctt
cctgaggaggatttctgtcctccggctccaaaccctgaagacatcatctacgatggagaa
accacctcctccaccacaggagaggaggagaaggaggaaggagagaggggggaagaagag
aaagaaaaggaggtgctggaggagaagcagagccttcaggcagaggagtaa
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